Monarch geneset OGS2.0

DPOGS214919
TranscriptDPOGS214919-TA3717 bp
ProteinDPOGS214919-PA1238 aa
Genomic positionDPSCF300153 + 302058-313852
RNAseq coverage338x (Rank: top 34%)
Annotation
HeliconiusHMEL0111150.077.95% 
BombyxBGIBMGA014008-TA0.072.61% 
Drosophilaglu-PA0.046.01% 
EBI UniRef50UniRef50_E9HNW20.049.07%Structural maintenance of chromosomes protein n=3 Tax=Eumetazoa RepID=E9HNW2_DAPPU
NCBI RefSeqXP_001842620.10.049.40%structural maintenance of chromosomes smc4 [Culex quinquefasciatus]
NCBI nr blastpgi|1700294800.049.40%structural maintenance of chromosomes smc4 [Culex quinquefasciatus]
NCBI nr blastxgi|1700294800.048.99%structural maintenance of chromosomes smc4 [Culex quinquefasciatus]
Group
Gene OntologyGO:00055241.6e-41ATP binding
GO:00055151.6e-41protein binding
GO:00512761.6e-41chromosome organization
GO:00056941.6e-41chromosome
KEGG pathwaycqu:CpipJ_CPIJ0009490.0 
 K06675 (SMC4)maps-> Cell cycle - yeast
InterPro domain[558-744] IPR0109351.6e-41SMCs flexible hinge
[861-1220] IPR0033951.1e-38RecF/RecN/SMC
Orthology groupMCL14224 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS214919-TA
ATGCAAAAGACCAAGACAAAAAGAGGTGAAGAACCAATGGAAGTTGACGATAATCAGTCACCAACAAGCGATCAAAATGTTAATGATGATGGAGAAATAGATCATATATCCGATGACGAGGAAGGTGGTATCCGGATAGGTGATATTTATATACCACCAGCGGCTAAGCCGGCTCTAACATTTGATTCAACAGGCCCAAGGCTGATTATAACGCATATAGTAAATGAAAATTTTAAAAGTTACGCTGGTGTGCAATCATTAGGCCCTTTTCATAAGAGTTTTACAGCCATCATAGGCCCAAATGGCAGTGGGAAGAGCAATGTCATTGATTCCATGCTATTTGTTTTCGGCTATCGAGCTACCAAAATCCGTTCAAAGAAGATTTCAGTTCTAATTCACTCTTCTAGTAAATTTCCAAATATAACAAGTGCTAGTGTTGCTGTACATTTCTGTCAGATAATCGATGGGGATGGTGAAGATTTCACAGTGGTACCTAATAGTGAGATAGTTGTATCAAGAACAGCGGCCAAAGATAATTCATCATATTACACTCTTAATGGAAAGCGAGTCCAGTTCAAAGAGGTTGCTAAAATGTTAAGGTCCCACGGAATAGATTTAGACCACAACAGGTTCCTTATTTTACAGGGTGAAGTGGAACAAATTGCTATGATGAAGCCAAAGGGTTTGACGGAACATGAATCTGGCATGCTCGAGTACTTGGAAGATATAATTGGTACCTCAAGATATAAGGAGCCGATAGAGAAACTATCAGATAAAGTTGAAGAATACACCGAAATGCGTAAAGAGAAATTAAATAGAGTGAGATTGGTTGAACAAGAAAAAAATAAATTGGAACAACCTATGAGAGAGGCCGTTGAACTGATGAATCTAACGAACGCCGCCTTGAGGACGAGGAATACATTATTACAGAAATATATCCACGAAACTAATAAAATAATTGAAAACAAAACAAAAGAATTGCAAGAACTTAAAGACGTCTTGGCGAAGATCGATGAGAAACTGGCGAGAATAAAAGATGAGCTACATGAAAAAACAACGGAATTGAAGAACGGCACTCAAAAATATGACCAACTCCAAAAACAAAAGGACGATATATCAGAGAAGTTGACGCAATGTAAGAAAAAAACTGTCACCGTGCAGGCCGACACGACGCAGGCGAACAAGAAGCGGAAAAATCTGGAACAGTTGATAGAACAGGAGAAGGGGAAATTAATTGACTTAGAACTCATTCCAGAAAAAAATAAACACGAGATAGAGGAATGTGAGAAATTATTGGACAAGCACAAAGAGAGTAAAGTTAATGCTGAGCAAGAGCTACAAACCGTTATGGCTGGGGTCAGATCAAAAACACAAGGTCTCCAAGAACAAAAAGATAAATTACAAGCAAAACTAATAGACCTAAAGAAAATAGTTGACGAAGCCAATAAGAACTCGAAGTTAGCCGAGTCCGAACTCAAAATATATTTAAGTACAGAGCAGAAAGAAATCGAAAAATTTAACAGAATGAAGGAAGTGTATGAGAAAGCCAAAAGCGATTTGGAAGAGAAAAAATCTCTACGTGAAGATCTTTCCTCTACTATACCAATGCAAGAACAACAAGTAAAAGAAATACAGACAAAACTACAGCAAATCAAGAAAGAAGAGATGTCTGCATCAAACGAAGCGAGGAGCCTGAGAGCACAATTAGAGGAATCCCGTCAAGCCATGAGCGCCAACAGATCTAGAGGGAGAGTTTTAGATTGTCTGATGAAGGAAAAGAGGGAAGGAAGATTACCAGGAATATTTGGTAGACTGGGCGATCTCGGCGGAATCGATGCTAAATACGACGTGGCCATATCGACGTGTTGCGGGGCCTTGGACAACATAGTTGTTGATAGCGTCGAAACGGCCCAACGGTGTGTCGAATATCTGAAGCACAACGACGTGGGCCGAGCGACGTTCATAGCGCTCGACAAGCAGCAACACCTCATCAAGTATTGCGAGAACAGGACGACTTATCCGGAGAACGTGCCGCGGCTATTCGACTTAGTTCGCGTGAAAGATTCCCGCGTGCTACCGGCGTTTTATTACGCTTTACGCGACACTTTGGTAGCCTCGAGTCTGGAACAAGCGACGAAGATCGCTTACGGGAACATTCGATACAGAGTCGTCACACTCCAAGGAGACGTAATAGAGATAGCAGAATTAAGAAACGAGCAGTCGAATCTAGAAGAAGCGTTTGTGAATGTGCAAAGAAATGCCAGGGAGGGAAAAACGACACTTCACAAGCTCGATATAGAAATTAAAAGTTTGGTCGAACAAGTTCCTGCTTTGAAGAGTCAAATAAAACAACAAGAAGCGAAAGTAACATCGAGTAAAGTCGACGCAAGACATAAAGCGAAATTGGAAGAAAATTTAAAGACAGCGGAAGAGAAACTGGAAACAGCGAAATATAATGCGGGGGAGCTAGAAAAAGAAGTGCACGGAGTAGACTCACAAATAGCGTTGGTAGCTGGTAACAAAGTAAGAGATCTGCAGAAAAATGTCGACGAACTGACGAATAAAATTAATAAAATATCTAGTGAAATGACTAAACTACGAGTGGCCATTAGTACTAGTATACGCAACGCAAAGAAATCCAAAGACAAACTGAATCAAATGGAAACCGATTTGAAGGAAACGGAAAAGAATTTGGAAAATCTTAACAATCAAAAGAAACAACTCACGCTTGACTCAGCTAAGCTACAGAAGGACTTTGACGAGTTGGAAGAACAAATAACAGAAGGTACCAGCGAATTTTCCGGCCTTAGACAAGAAATATCAAAACTTCAATCCAAAGAAAATAAAATGAAAAGTGAAAGATTGGAAGCAAATAATGCGGTCAACAAAATGGAAAAATCCGTACAAGATTGTACTACAAAGATACCGTTGTGGGAGAAAGAGCTAACGTCACTAAAGCTAGAAGATCCGGGAATAGAAATACCGGGTATAGAACGCCCTCAGCCCTTACAAAAGCACACTCCAAATGAGTTGGATGAAACGTCGGTGGATGAATTAAGAAATAGACTAACTGCCCAGAAAGCTAGGATAGGGGACAATAAACCTAATTTGCAAGCCATACAGGATTACCGTACTAAAGAGGAACTCTATTTGAAGCGAGCCTCCGAACTAGAAGACATAACAAACAAAAGAAATGAAATGAGAGCATTATATGATCAACTGAAAAAGAAACGGACTACTGATTTCTTATGTGGGTTCAGCACGATAACAACGAAATTAAAAGAAATGTATCAGATGATAACGCTGGGGGGAGACGCGGAGTTGGAGCTTGTCGACTCTTTGGACCCCTTCACCGAAGGAATTATATTCAGCGTTCGACCGCCAAATAAATCGTGGAAGAACATATCAAACCTGTCCGGTGGTGAGAAAACGTTGTCGTCATTGGCGCTAGTGTTTGCTTTACATTATTACAAACCCACACCTTTATATGTTATGGACGAAATAGACGCGGCGTTGGACTTTAAAAACGTCTCTATAGTCGCTAATTATATCAAAGAAAGGACAAAGAACGCTCAGTTCATTATAATATCCCTTCGGTACAATATGTTTGAAGTCTCCAATCGCCTGGTGGGTATTTACAAGACAGAGGACTGTACTAAATCCGTGACCATAGAAAATAAACTACCCGAGCAAACTGTAACAGACGTTATGGCTTGA

Protein sequence:

>DPOGS214919-PA
MQKTKTKRGEEPMEVDDNQSPTSDQNVNDDGEIDHISDDEEGGIRIGDIYIPPAAKPALTFDSTGPRLIITHIVNENFKSYAGVQSLGPFHKSFTAIIGPNGSGKSNVIDSMLFVFGYRATKIRSKKISVLIHSSSKFPNITSASVAVHFCQIIDGDGEDFTVVPNSEIVVSRTAAKDNSSYYTLNGKRVQFKEVAKMLRSHGIDLDHNRFLILQGEVEQIAMMKPKGLTEHESGMLEYLEDIIGTSRYKEPIEKLSDKVEEYTEMRKEKLNRVRLVEQEKNKLEQPMREAVELMNLTNAALRTRNTLLQKYIHETNKIIENKTKELQELKDVLAKIDEKLARIKDELHEKTTELKNGTQKYDQLQKQKDDISEKLTQCKKKTVTVQADTTQANKKRKNLEQLIEQEKGKLIDLELIPEKNKHEIEECEKLLDKHKESKVNAEQELQTVMAGVRSKTQGLQEQKDKLQAKLIDLKKIVDEANKNSKLAESELKIYLSTEQKEIEKFNRMKEVYEKAKSDLEEKKSLREDLSSTIPMQEQQVKEIQTKLQQIKKEEMSASNEARSLRAQLEESRQAMSANRSRGRVLDCLMKEKREGRLPGIFGRLGDLGGIDAKYDVAISTCCGALDNIVVDSVETAQRCVEYLKHNDVGRATFIALDKQQHLIKYCENRTTYPENVPRLFDLVRVKDSRVLPAFYYALRDTLVASSLEQATKIAYGNIRYRVVTLQGDVIEIAELRNEQSNLEEAFVNVQRNAREGKTTLHKLDIEIKSLVEQVPALKSQIKQQEAKVTSSKVDARHKAKLEENLKTAEEKLETAKYNAGELEKEVHGVDSQIALVAGNKVRDLQKNVDELTNKINKISSEMTKLRVAISTSIRNAKKSKDKLNQMETDLKETEKNLENLNNQKKQLTLDSAKLQKDFDELEEQITEGTSEFSGLRQEISKLQSKENKMKSERLEANNAVNKMEKSVQDCTTKIPLWEKELTSLKLEDPGIEIPGIERPQPLQKHTPNELDETSVDELRNRLTAQKARIGDNKPNLQAIQDYRTKEELYLKRASELEDITNKRNEMRALYDQLKKKRTTDFLCGFSTITTKLKEMYQMITLGGDAELELVDSLDPFTEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRYNMFEVSNRLVGIYKTEDCTKSVTIENKLPEQTVTDVMA-