DPOGS214929 | ||
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Transcript | DPOGS214929-TA | 357 bp |
Protein | DPOGS214929-PA | 118 aa |
Genomic position | DPSCF300163 - 685-2654 | |
RNAseq coverage | 0x (Rank: top 99%) |
Annotation | ||||
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Heliconius | HMEL013125 | 5e-25 | 85.19% |   |
Bombyx | BGIBMGA010805-TA | 1e-35 | 88.73% |   |
Drosophila | RpI135-PA | 3e-32 | 82.86% |   |
EBI UniRef50 | UniRef50_E2AY84 | 4e-30 | 80.00% | DNA-directed RNA polymerase n=2 Tax=Formicidae RepID=E2AY84_CAMFO |
NCBI RefSeq | XP_001606574.1 | 3e-32 | 85.71% | PREDICTED: similar to CG4033-PA, partial [Nasonia vitripennis] |
NCBI nr blastp | gi|345484997 | 7e-31 | 85.71% | PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nasonia vitripennis] |
NCBI nr blastx | gi|345484997 | 5e-30 | 85.71% | PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nasonia vitripennis] |
Group | ||||
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Gene Ontology | GO:0003899 | 1.4e-39 | DNA-directed RNA polymerase activity | |
GO:0032549 | 1.4e-39 | ribonucleoside binding | ||
GO:0006351 | 1.4e-39 | transcription, DNA-dependent | ||
GO:0003677 | 1.5e-17 | DNA binding | ||
KEGG pathway | nvi:100121840 | 1e-31 |   | |
  | K03002 (RPA2) | maps-> | Purine metabolism | |
  |   |   | Pyrimidine metabolism | |
  |   |   | RNA polymerase | |
InterPro domain | [44-114] IPR015712 | 1.4e-39 | DNA-directed RNA polymerase, subunit 2 | |
[46-114] IPR007120 | 1.5e-17 | DNA-directed RNA polymerase, subunit 2, domain 6 | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214929-TA
ATGACAACTCGTGGTATATCTAACAGGGACGAGAGGTTAATTAAATTTTCTTTAGAAAATGCATTCCAAGCGTCGCAACTATACGATGATACACATTCGTCAAGTAAAGATATTGATTTTCTGTTCTTCAAAGTCCACGACGCTACGCCGTTCCGCTTCAACGAACAGGACACGGCCATCAATTACTTCGGGCGCCTGCTGGAGGCCGGCGGCTACAACTACTACGGCACGGAGAGGATCTACAGCGGCGTCGACGGCCGCGAGATGCAGGCCGACATATTCTGCGGACTAGTGCACTACCAGCGGCTGCGGCACATGGTGTCCGACAAGTGGCAGGTGCGGCTGGCTGCATGTTGA
>DPOGS214929-PA
MTTRGISNRDERLIKFSLENAFQASQLYDDTHSSSKDIDFLFFKVHDATPFRFNEQDTAINYFGRLLEAGGYNYYGTERIYSGVDGREMQADIFCGLVHYQRLRHMVSDKWQVRLAAC-