| DPOGS214930 | ||
|---|---|---|
| Transcript | DPOGS214930-TA | 420 bp |
| Protein | DPOGS214930-PA | 139 aa |
| Genomic position | DPSCF300163 + 71787-72585 | |
| RNAseq coverage | 1111x (Rank: top 11%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008202 | 2e-69 | 82.61% | |
| Bombyx | BGIBMGA006919-TA | 5e-69 | 80.58% | |
| Drosophila | mRpL16-PA | 7e-50 | 59.71% | |
| EBI UniRef50 | UniRef50_O46082 | 1e-47 | 59.71% | EG:63B12.2 protein n=44 Tax=Coelomata RepID=O46082_DROME |
| NCBI RefSeq | XP_001845658.1 | 2e-50 | 61.59% | gar2 [Culex quinquefasciatus] |
| NCBI nr blastp | gi|289742369 | 2e-50 | 63.31% | mitochondrial ribosomal protein L16 [Glossina morsitans morsitans] |
| NCBI nr blastx | gi|332025638 | 1e-50 | 65.94% | 39S ribosomal protein L16, mitochondrial [Acromyrmex echinatior] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006412 | 8.5e-75 | translation | |
| GO:0003735 | 8.5e-75 | structural constituent of ribosome | ||
| GO:0019843 | 8.5e-75 | rRNA binding | ||
| GO:0005840 | 3.5e-25 | ribosome | ||
| KEGG pathway | rca:Rcas_4019 | 1e-09 | ||
| K02878 (RP-L16, rplP) | maps-> | Ribosome | ||
| InterPro domain | [1-140] IPR000114 | 8.5e-75 | Ribosomal protein L16 | |
| [1-89] IPR016180 | 3.5e-25 | Ribosomal protein L10e/L16 | ||
| Orthology group | MCL12861 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214930-TA
ATGGTACGTCTTCAAGTAGCAAGGAGGTTAGATATGAAAAGAATGTTTGCCATATGGAGGGTAGATCCACCGTGGCAGCCAGTGACCAAAAAAGGTCAAGGTCAACGGATGGGTGGAGGAAAAGGGGCCATTGACCACTATGTCACACCAATTAAGGCAGATAGGATAATATTTGAAATCGGCGGCAAATGTGAATACGCTGAGGTACATGATATGCTAAGAATAATAGCAGAAAGATTACCATTTAAGGCAGAACCAATATCACAGGAGCTTTTAGAGAAAAAAGCAGCATCTGAAAAATGGTGTGAAGAAAATAACAGTAATAAGTTTACTTTGAAATATGTCATCCAGAACAACATGGGCGGATGTCACAGATTCCTATCAAAATACGATCACAAGTGGTACGGAAAATACTTCTAA
>DPOGS214930-PA
MVRLQVARRLDMKRMFAIWRVDPPWQPVTKKGQGQRMGGGKGAIDHYVTPIKADRIIFEIGGKCEYAEVHDMLRIIAERLPFKAEPISQELLEKKAASEKWCEENNSNKFTLKYVIQNNMGGCHRFLSKYDHKWYGKYF-