Monarch geneset OGS2.0

DPOGS214953
TranscriptDPOGS214953-TA768 bp
ProteinDPOGS214953-PA255 aa
Genomic positionDPSCF300280 + 121271-122038
RNAseq coverage466x (Rank: top 27%)
Annotation
HeliconiusHMEL0222164e-3244.37% 
BombyxBGIBMGA004850-TA9e-11680.97% 
DrosophilaCG5823-PA1e-3143.88% 
EBI UniRef50UniRef50_G8GE152e-11380.97%Ubiquitin-conjugating enzyme E2 J1-like protein n=13 Tax=Neoptera RepID=G8GE15_BOMMO
NCBI RefSeqXP_393288.28e-8262.65%PREDICTED: similar to ubiquitin-conjugating enzyme E2, J1 [Apis mellifera]
NCBI nr blastpgi|3580315765e-11380.97%ubiquitin-conjugating enzyme E2 J1-like [Bombyx mori]
NCBI nr blastxgi|3580315764e-11482.59%ubiquitin-conjugating enzyme E2 J1-like [Bombyx mori]
Group
Gene OntologyGO:00168812.5e-22acid-amino acid ligase activity
KEGG pathwayame:4097942e-81 
 K10578 (UBE2J1, NCUBE1, UBC6)maps-> Ubiquitin mediated proteolysis
    Parkinson's disease
    Protein processing in endoplasmic reticulum
InterPro domain[11-157] IPR0161354.5e-37Ubiquitin-conjugating enzyme/RWD-like
[17-127] IPR0006082.5e-22Ubiquitin-conjugating enzyme, E2
Orthology groupMCL17348 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS214953-TA
ATGGTTGAAATGGGTGAGAAATATAATACTAAGTGTCCTGGTGTTAAAAGACTAATGAGAGAAGCCATGGAGTTAGCGGAAGCAACCGAAGAATATTGCGCCAGACCACTCGAAGACAACCTGTTTGAGTGGCACTTTACTGTTCGAGGACCTGTGGGAACTGATTTCGAGGGTGGTGTTTACCATGGCAGGATATTGTTACCAAAAGAATATCCTATGCAGCCCCCCCACATAATCTTGCTTACACCAAATGGAAGATTTGAAGTTAATAAAAAAATATGTTTATCAATTTCTGGACACCATCCAGAAACCTGGCAGCCATCCTGGTCAATAAGAACAGCTTTATTAGCTTTGATTGCTTTTATGCCTACTCCAGCAGAAGGAACTATTGGATCTTTAGATTATTCTCCTGCAGAACGCAAACTTCTTGCCAAAAAGTCTAACGCCTGGGTATGCTCTCAGTGTGGTGATATTACAGCATTACTTTCATCCACAGCCGCTAAACCACCAACAGAGGAAGAACAAACCGTGTTAAATCAAATAGCATTCAAGGGTGAAGACGAGCAAGCCAGGTCTACTTTACCAGAACCAGTCTTTGAGCCTCAAAATGTACCTCAATATGCAGAAAGAGTTCTGGAATCTTCTGACAACACAACTAGTTTTCTGGACCAACTAACTGAGATCTTGGTGGCTCTGCTGGTAGGAGTTATTGGTATATTCATTTACAGACGTTGGAATGCTCATATGCCGGTTGACCCTGAACTATAA

Protein sequence:

>DPOGS214953-PA
MVEMGEKYNTKCPGVKRLMREAMELAEATEEYCARPLEDNLFEWHFTVRGPVGTDFEGGVYHGRILLPKEYPMQPPHIILLTPNGRFEVNKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGTIGSLDYSPAERKLLAKKSNAWVCSQCGDITALLSSTAAKPPTEEEQTVLNQIAFKGEDEQARSTLPEPVFEPQNVPQYAERVLESSDNTTSFLDQLTEILVALLVGVIGIFIYRRWNAHMPVDPEL-