| DPOGS215006 | ||
|---|---|---|
| Transcript | DPOGS215006-TA | 549 bp |
| Protein | DPOGS215006-PA | 182 aa |
| Genomic position | DPSCF300256 + 118678-120555 | |
| RNAseq coverage | 771x (Rank: top 17%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL014830 | 1e-45 | 95.35% | |
| Bombyx | BGIBMGA012192-TA | 5e-40 | 89.41% | |
| Drosophila | ytr-PA | 3e-28 | 77.46% | |
| EBI UniRef50 | UniRef50_F4WTE1 | 2e-31 | 78.21% | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein n=1 Tax=Acromyrmex echinatior RepID=F4WTE1_ACREC |
| NCBI RefSeq | XP_001661409.1 | 3e-31 | 75.00% | hypothetical protein AaeL_AAEL011101 [Aedes aegypti] |
| NCBI nr blastp | gi|332022218 | 6e-31 | 78.21% | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Acromyrmex echinatior] |
| NCBI nr blastx | gi|380016217 | 2e-44 | 65.58% | PREDICTED: uncharacterized protein LOC100872450 [Apis florea] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | aag:AaeL_AAEL011101 | 9e-31 | ||
| K12846 (SNRNP27) | maps-> | Spliceosome | ||
| InterPro domain | [32-181] IPR013957 | 6e-44 | Domain of unknown function DUF1777 | |
| Orthology group | MCL17031 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215006-TA
ATGACTCGGCCTCGGTCGAATCGATGTTTGTACGAAAGATTACACAGCGACTCCAACCCGGCCGAGTTGGAAATACTGAACGGCAGGGCGATTAGTATGGGTCGCTCGCCGAGTCCTCGGCGGCGTGAGGACAGGCGAGATCGGAGGGATAGGGACCGGGACAGAGACAGGGATCGAGAGAGACGGAGGCAGCGGACACGCTCGAGATCAAGATCCTTGGAACGGCGGCGACGTTCCCCGGAGAGGAGACGCTCACCGTCCCCGCGCCGGCGGAGATCGCGGACAGTGTCGCCGTCCACATCGTTCGTCCCGAAGCCGAAGAAAAACTTCGGCGAGCGGCCTATCGTCACCCCCGCAGACTTGGAGGGAAAGTCCCCCGAGGAACAAGAAATGCTCAAAGTTATGGGCTTCTGCGGCTTCGACTCCACTAAAGGTAAGAAGGTCGACGGCAACGTAGAGGGTGACGTGCACGTGGTGTTGAAGAGGAAATACAGACAGTATATGAATAGGAAGGGGGGCTTCAACAGGCCCCTCGACTTTGTTGCTTAG
>DPOGS215006-PA
MTRPRSNRCLYERLHSDSNPAELEILNGRAISMGRSPSPRRREDRRDRRDRDRDRDRDRERRRQRTRSRSRSLERRRRSPERRRSPSPRRRRSRTVSPSTSFVPKPKKNFGERPIVTPADLEGKSPEEQEMLKVMGFCGFDSTKGKKVDGNVEGDVHVVLKRKYRQYMNRKGGFNRPLDFVA-