DPOGS215042 | ||
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Transcript | DPOGS215042-TA | 615 bp |
Protein | DPOGS215042-PA | 204 aa |
Genomic position | DPSCF300208 - 342267-348367 | |
RNAseq coverage | 2323x (Rank: top 5%) |
Annotation | ||||
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Heliconius | HMEL002010 | 6e-34 | 92.42% |   |
Bombyx | BGIBMGA005672-TA | 5e-33 | 96.83% |   |
Drosophila | RhoGDI-PA | 3e-81 | 76.24% |   |
EBI UniRef50 | UniRef50_UPI00020632AA | 3e-86 | 81.32% | UPI00020632AA related cluster n=2 Tax=unknown RepID=UPI00020632AA |
NCBI RefSeq | XP_001604074.1 | 4e-88 | 81.77% | PREDICTED: similar to Rho GDP-dissociation inhibitor [Nasonia vitripennis] |
NCBI nr blastp | gi|307182197 | 7e-90 | 81.15% | HEAT repeat-containing protein 2 [Camponotus floridanus] |
NCBI nr blastx | gi|383858014 | 8e-89 | 82.38% | PREDICTED: HEAT repeat-containing protein 2-like [Megachile rotundata] |
Group | ||||
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Gene Ontology | GO:0005094 | 3.9e-133 | Rho GDP-dissociation inhibitor activity | |
GO:0005737 | 3.9e-133 | cytoplasm | ||
KEGG pathway | nvi:100120432 | 1e-87 |   | |
  | K12462 (ARHGDI, RHOGDI) | maps-> | Neurotrophin signaling pathway | |
  |   |   | Vasopressin-regulated water reabsorption | |
InterPro domain | [13-205] IPR000406 | 3.9e-133 | RHO protein GDP dissociation inhibitor | |
[2-204] IPR014756 | 2.9e-73 | Immunoglobulin E-set | ||
Orthology group | MCL13566 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215042-TA
ATGTCTGGTGAGCCGGAACTGGCCCGCACTCCTGAAGATGATACCGAAGAGGAGGAAATCAAGTCTTCATACAAGCCACCACCGGAGAAGAGCATTGAAGAGATCTTATCAGCCGACCAGGAAGATGAATCATTGAGGAAGTACAAGGAAGCTTTACTGGGGCAGGCTCAAACGGGGCCGGTTATTGTCGATGCAAACGATCCCCGGAAGGTGATAGTCAAGAAGTTGGCCCTTTGTGTCGCGGAGAGGGACGACCTTGAACTAGACCTGTCAGGAGACCTCACAGATCTTAAGAAACAGGTGTTCGTGATAAAGGAAGGTGTCCAGTACAAGATAAGGATCGACTTCATAGTGCAGAGGGAGATAGTGCATGGGCTCAAATACGTTCAGAAGACATACCGCTTAGGGGTACCAGTCGATAAGATGACTCACATGGTCGGCTCGTATCCTCCGAAGACCGAGATCCAGTCGTACACGACGCCGCCCGAAGACGCTCCCTCCGGCATGATGGCGCGAGGCTCTTACACTGTGAACAGTCTCTTCACCGACGACGATAAGAACGTGCACCTCCAATGGGAATGGAGCTTCGAGATCAAGAAAGACTGGAAAGAATAG
>DPOGS215042-PA
MSGEPELARTPEDDTEEEEIKSSYKPPPEKSIEEILSADQEDESLRKYKEALLGQAQTGPVIVDANDPRKVIVKKLALCVAERDDLELDLSGDLTDLKKQVFVIKEGVQYKIRIDFIVQREIVHGLKYVQKTYRLGVPVDKMTHMVGSYPPKTEIQSYTTPPEDAPSGMMARGSYTVNSLFTDDDKNVHLQWEWSFEIKKDWKE-