| DPOGS215042 | ||
|---|---|---|
| Transcript | DPOGS215042-TA | 615 bp |
| Protein | DPOGS215042-PA | 204 aa |
| Genomic position | DPSCF300208 - 342267-348367 | |
| RNAseq coverage | 2323x (Rank: top 5%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002010 | 6e-34 | 92.42% | |
| Bombyx | BGIBMGA005672-TA | 5e-33 | 96.83% | |
| Drosophila | RhoGDI-PA | 3e-81 | 76.24% | |
| EBI UniRef50 | UniRef50_UPI00020632AA | 3e-86 | 81.32% | UPI00020632AA related cluster n=2 Tax=unknown RepID=UPI00020632AA |
| NCBI RefSeq | XP_001604074.1 | 4e-88 | 81.77% | PREDICTED: similar to Rho GDP-dissociation inhibitor [Nasonia vitripennis] |
| NCBI nr blastp | gi|307182197 | 7e-90 | 81.15% | HEAT repeat-containing protein 2 [Camponotus floridanus] |
| NCBI nr blastx | gi|383858014 | 8e-89 | 82.38% | PREDICTED: HEAT repeat-containing protein 2-like [Megachile rotundata] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005094 | 3.9e-133 | Rho GDP-dissociation inhibitor activity | |
| GO:0005737 | 3.9e-133 | cytoplasm | ||
| KEGG pathway | nvi:100120432 | 1e-87 | ||
| K12462 (ARHGDI, RHOGDI) | maps-> | Neurotrophin signaling pathway | ||
| Vasopressin-regulated water reabsorption | ||||
| InterPro domain | [13-205] IPR000406 | 3.9e-133 | RHO protein GDP dissociation inhibitor | |
| [2-204] IPR014756 | 2.9e-73 | Immunoglobulin E-set | ||
| Orthology group | MCL13566 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215042-TA
ATGTCTGGTGAGCCGGAACTGGCCCGCACTCCTGAAGATGATACCGAAGAGGAGGAAATCAAGTCTTCATACAAGCCACCACCGGAGAAGAGCATTGAAGAGATCTTATCAGCCGACCAGGAAGATGAATCATTGAGGAAGTACAAGGAAGCTTTACTGGGGCAGGCTCAAACGGGGCCGGTTATTGTCGATGCAAACGATCCCCGGAAGGTGATAGTCAAGAAGTTGGCCCTTTGTGTCGCGGAGAGGGACGACCTTGAACTAGACCTGTCAGGAGACCTCACAGATCTTAAGAAACAGGTGTTCGTGATAAAGGAAGGTGTCCAGTACAAGATAAGGATCGACTTCATAGTGCAGAGGGAGATAGTGCATGGGCTCAAATACGTTCAGAAGACATACCGCTTAGGGGTACCAGTCGATAAGATGACTCACATGGTCGGCTCGTATCCTCCGAAGACCGAGATCCAGTCGTACACGACGCCGCCCGAAGACGCTCCCTCCGGCATGATGGCGCGAGGCTCTTACACTGTGAACAGTCTCTTCACCGACGACGATAAGAACGTGCACCTCCAATGGGAATGGAGCTTCGAGATCAAGAAAGACTGGAAAGAATAG
>DPOGS215042-PA
MSGEPELARTPEDDTEEEEIKSSYKPPPEKSIEEILSADQEDESLRKYKEALLGQAQTGPVIVDANDPRKVIVKKLALCVAERDDLELDLSGDLTDLKKQVFVIKEGVQYKIRIDFIVQREIVHGLKYVQKTYRLGVPVDKMTHMVGSYPPKTEIQSYTTPPEDAPSGMMARGSYTVNSLFTDDDKNVHLQWEWSFEIKKDWKE-