| DPOGS215046 | ||
|---|---|---|
| Transcript | DPOGS215046-TA | 465 bp |
| Protein | DPOGS215046-PA | 154 aa |
| Genomic position | DPSCF300208 - 139163-139627 | |
| RNAseq coverage | 0x (Rank: top 99%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002884 | 2e-13 | 27.46% | |
| Bombyx | % | |||
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_E4Z8N8 | 2e-12 | 36.67% | Putative RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Malus x domestica RepID=E4Z8N8_MALDO |
| NCBI RefSeq | XP_781028.2 | 9e-11 | 29.27% | PREDICTED: similar to RNA-directed DNA polymerase (Reverse transcriptase) [Strongylocentrotus purpuratus] |
| NCBI nr blastp | gi|313184298 | 7e-12 | 36.67% | putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus x domestica] |
| NCBI nr blastx | gi|313184298 | 6e-13 | 36.67% | putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus x domestica] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003964 | 8.6e-11 | RNA-directed DNA polymerase activity | |
| GO:0003723 | 8.6e-11 | RNA binding | ||
| GO:0006278 | 8.6e-11 | RNA-dependent DNA replication | ||
| KEGG pathway | ||||
| InterPro domain | [8-141] IPR000477 | 8.6e-11 | Reverse transcriptase | |
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215046-TA
ATGGAAAGTGAGGTAAGGCTGTACCTGTTCGGGTTAAGGCAAGGAAACGGTACAACGGACACCATATTTAGCGCTAAGACATCTCGGTGCAAAGAGCACATGTGCTCACACAATAACTTGTATATGGTGTTCATTGACATACAGAAAGCGTACGATAGAGTACTCCATGAGACTCTTTGGTGGATTTTGAAAGCGAAAGAAATGTTAGGGAAATACCAGCAGCTTATTAGAATGCAGTACAGCCATGCAGGTATTGAAGTTCGATCCGTATCCAGTAAAATAGATAACTTCGATGTAGCTGTAAACTTACGTCAGTGGTCGGCTTCAAGCAATTACTTGTTTCTTCTCACAATGGATGAACTGAGATCCGAGTTCAAGAGAAGGTATCTTGGTCTATATGGTTTGTCAACAATATTGTACTTTTCGGAGAAACGACGCTTGAGGTACCAGAGAATGTGGGGCTAA
>DPOGS215046-PA
MESEVRLYLFGLRQGNGTTDTIFSAKTSRCKEHMCSHNNLYMVFIDIQKAYDRVLHETLWWILKAKEMLGKYQQLIRMQYSHAGIEVRSVSSKIDNFDVAVNLRQWSASSNYLFLLTMDELRSEFKRRYLGLYGLSTILYFSEKRRLRYQRMWG-