Monarch geneset OGS2.0

DPOGS215109
TranscriptDPOGS215109-TA2778 bp
ProteinDPOGS215109-PA925 aa
Genomic positionDPSCF300139 + 79315-95576
RNAseq coverage27x (Rank: top 77%)
Annotation
HeliconiusHMEL0045800.088.61% 
BombyxBGIBMGA009597-TA0.074.35% 
DrosophilaCG11155-PA0.058.08% 
EBI UniRef50UniRef50_Q9V4A00.058.08%CG11155, isoform A n=22 Tax=Endopterygota RepID=Q9V4A0_DROME
NCBI RefSeqXP_002431577.10.060.82%glutamate receptor, ionotropic kainate 2 precursor, putative [Pediculus humanus corporis]
NCBI nr blastpgi|3287776320.061.68%PREDICTED: glutamate receptor, ionotropic kainate 2-like [Apis mellifera]
NCBI nr blastxgi|3287776320.058.83%PREDICTED: glutamate receptor, ionotropic kainate 2-like [Apis mellifera]
Group
Gene OntologyGO:00160209.1e-110membrane
GO:00052349.1e-110extracellular-glutamate-gated ion channel activity
GO:00049709.1e-110ionotropic glutamate receptor activity
GO:00052166.1e-16ion channel activity
GO:00048726.1e-16receptor activity
GO:00068116.1e-16ion transport
KEGG pathwaymdo:1000208890.0 
 K05202 (GRIK2)maps-> Neuroactive ligand-receptor interaction
InterPro domain[404-773] IPR0013209.1e-110Ionotropic glutamate receptor
[38-365] IPR0018285.7e-38Extracellular ligand-binding receptor
[414-478] IPR0195943.9e-28Glutamate receptor, L-glutamate/glycine-binding
[534-559] IPR0015086.1e-16NMDA receptor
Orthology groupMCL10026 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS215109-TA
ATGTGGAAAGAGTGGCGCTGGCTCGTACTGATCCTCAACGCTGTGGCTGCATTGTCACCTGTGATTAAAATAGGAGCAATTTTCACTGAAGAAGCCCGCGGTGGCAGCGCCGAGTTGGCTTTCAAGTACGCCGTGTACAGGATAAATAAAGAGAGAAATTTACTACCAGAAAGCACCCTAGTATACGACATACAGTACACTACAACAAGGGACTCCTTCAGGACTTACAAGAAAGCCTGCACTCAAATAAAATCAGGTGCTATAGCCATCTTCAGCAGTGCTGGGCCACTGCTCGGTTCTACTCTGTCAGCTATGTGTCGCACCCTGCACGCACCACACTTGACAGTGGCACCCCACGTAGTTGAGAGTCCAGGTTTGTGTTGTGATTACACGATCAATCTGTATCCATCTAGGGACCTTTTGGACACTGCGTTCGTTGACCTCACCGCTTTCCTCAACTGGACGAGGATGGGTATTATATATGAGGATTACGGGAACGGCGAACTAAACATAGTTCGGCTGGCGAGAGATGGTCGCGATATGTACGCCGTGAGATGTGAGTCACGTGACTATAGACGAGCCCTCGCGCAACTGAAGGCCCAAGATATAAAGCATATTATCGTCGACACTGACCCGAAGCATTTGAGGCTGCTTTCAAGGGCTATCTTGCAGTTGCAAATGAACAATGAAAACTATCACTACATATTCACGACGTTCGACATGGAGTTGTTTGACCTGGAAGACTTCCTCTATAATCGCGTCAATATGAGCGGCTGGCGTTTGGTAGATCGGGACTCCGATAAAGTCAAGGATGTGCTCACAGTTATGGAGAAGTTCCATCCCATTGGAGCTTCAATACTCAGCGGTGGCCATATTAAGACGGAACCGGCGCTTATCTACGACGCAGTTCAAGTCCTGGCCCTAGCGCTCGCCTCGACCCGCGACGTGAGCGCCACTAATGCATCCTGCGACACTGAAACAACCGTCGCATACGGCAGTGTACTGTTGGAAAACATCAATAAGGTACAAGCACACGGTCTGACGGGTCCGATCGCTTTTACCAACGGCAACCGTAAAACGTTCAACCTCCAGCTGATGAGACTGTCAGCGGAGCGTAGGGCTGCAGTCCTAGCAGGGCACTGGACCAAGGACGGGGGACTGGAGGTCACTGATCCAGCCGCTTATAGGAGAGACCCACCACCGAATGTCACGCTAACTGTGGTCACTGTCGAGGAGAAACCCTACGTTATGGTGAAGGAAGGATGGAATCTTCAAGGTAACGCTCGCTTCGAGGGTTTCTGCATAGACCTTTTGGCGCGGGTAGCAGCACGAGCTGGGTTCAGCTATAGACTGCGGCTTGTTCCTGGTAACGTGTACGGAGCGAGGGATCCCGCTACTGGACAATGGAATGGAATCGTGAGAGAGCTTGTGGATCGGAAAGCTGATATCGCGGTAGCCTCGATGACCATAAACTACGCGCGAGAAGCGGTCATAGACTTCACTAAACCGTTCATGAATTTAGGAATTGGAATACTCTTCAAGGTACCTTCATCTCAACCGACTCGTCTCTTCAGTTTCTTGAACCCCTTGGCAGTTGAGATATGGCTTTACGTCCTCGCTGCTTACATTCTCGTCAGCTTCACACTGTTCGTGATGGCCAGGTTCTCACCTTATGAATGGTCTTCCAGCACTCATATCTGCGGTCACGAGACCAAACTCTTGACCAATCAGTTTAGTGTTTGCAACTCCTTCTGGTTCATCACCGGCACCTTCCTAAGACAGGGATCCGGTTTAAATCCCAAGGCAACATCGACACGAATAGTTGGCGGCATCTGGTGGTTTTTTACACTGATTATCCTCTCCTCGTATACTGCTAACCTGGCCGCCTTCCTGACGGTGGAGCGCACGGTGCTGCCAATCCAGAGTGCTGCAGATCTTGCAGCACAGAACAGCGTGCAGTACGGAACATTGAGTGGAGGATCCACTATGACTTTCTTCAGGGACTCCAACATTGATATTTATCAGCGTATGTGGGATCATATGTCTCGTGCGTCGCCACCAGCGTTAGTGGCTTCGTATGAGGAGGGCGTGCGTCGTGTGCTGGCGGGGAACTATGCTTTCCTTATGGAGTCCACGATGTTGGATCACCGCGTACAGAGGGACTGCAACCTCACTCAGGTCGGCGGGCTCCTAGACTCTAAGGGCTACGGAATAGCCACTTGGAAAGGAAGCCCTTGGAGGGATAAAATTTCGCTCGCAATATTAGAGTTACAAGAAAAGGGGGTTATTCAGATATTATACGATAAATGGTGGAAGAACACCGGCGATGTATGCAATCGGGATGGCAAGGACAGCAAGGCGAATCCGTTAGGAGTACAAAATATTGGTGGTGTTTTCGTAACGTTACTGTGCGGACTCGTGCTGGCGATAGTTGTCGCTATATTGGAATTCTGTTGGAACACAAAGAAAAACGCATCTCAGGGAAGACAGTCGCTCTGCAGTGAGATGGGTCAGGAGCTAAGTGCTGCTCTCCGCGGCGGTAAGTCCCGCGCTGCCCCCCGTCCGTGCTGCACGCGCTGTGACCGCGGCACACACGTGCCAACCGGAGACGTCTGTGAGTACGGTGGAGTTGAAGGAGCTGAGATGGTCATAGCGCTCAGCGCGGCGCGGCGCCTCCGCCCCCGCTTCCCCTGCGCCCGCGTCCGCTCTCCGTCGTCCTCCAGCACGGGTTGTGGGTTTAAATTCGGCTCGTGTCGTGAATTCTTCATTAACGAGTGA

Protein sequence:

>DPOGS215109-PA
MWKEWRWLVLILNAVAALSPVIKIGAIFTEEARGGSAELAFKYAVYRINKERNLLPESTLVYDIQYTTTRDSFRTYKKACTQIKSGAIAIFSSAGPLLGSTLSAMCRTLHAPHLTVAPHVVESPGLCCDYTINLYPSRDLLDTAFVDLTAFLNWTRMGIIYEDYGNGELNIVRLARDGRDMYAVRCESRDYRRALAQLKAQDIKHIIVDTDPKHLRLLSRAILQLQMNNENYHYIFTTFDMELFDLEDFLYNRVNMSGWRLVDRDSDKVKDVLTVMEKFHPIGASILSGGHIKTEPALIYDAVQVLALALASTRDVSATNASCDTETTVAYGSVLLENINKVQAHGLTGPIAFTNGNRKTFNLQLMRLSAERRAAVLAGHWTKDGGLEVTDPAAYRRDPPPNVTLTVVTVEEKPYVMVKEGWNLQGNARFEGFCIDLLARVAARAGFSYRLRLVPGNVYGARDPATGQWNGIVRELVDRKADIAVASMTINYAREAVIDFTKPFMNLGIGILFKVPSSQPTRLFSFLNPLAVEIWLYVLAAYILVSFTLFVMARFSPYEWSSSTHICGHETKLLTNQFSVCNSFWFITGTFLRQGSGLNPKATSTRIVGGIWWFFTLIILSSYTANLAAFLTVERTVLPIQSAADLAAQNSVQYGTLSGGSTMTFFRDSNIDIYQRMWDHMSRASPPALVASYEEGVRRVLAGNYAFLMESTMLDHRVQRDCNLTQVGGLLDSKGYGIATWKGSPWRDKISLAILELQEKGVIQILYDKWWKNTGDVCNRDGKDSKANPLGVQNIGGVFVTLLCGLVLAIVVAILEFCWNTKKNASQGRQSLCSEMGQELSAALRGGKSRAAPRPCCTRCDRGTHVPTGDVCEYGGVEGAEMVIALSAARRLRPRFPCARVRSPSSSSTGCGFKFGSCREFFINE-