DPOGS215116 | ||
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Transcript | DPOGS215116-TA | 573 bp |
Protein | DPOGS215116-PA | 190 aa |
Genomic position | DPSCF300139 + 323711-326886 | |
RNAseq coverage | 1x (Rank: top 95%) |
Annotation | ||||
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Heliconius | HMEL014232 | 1e-62 | 91.60% |   |
Bombyx | BGIBMGA001685-TA | 9e-32 | 44.44% |   |
Drosophila | CG7372-PA | 3e-32 | 38.79% |   |
EBI UniRef50 | UniRef50_Q4SJJ8 | 5e-36 | 48.32% | Chromosome 4 SCAF14575, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SJJ8_TETNG |
NCBI RefSeq | XP_001951603.1 | 4e-37 | 42.51% | PREDICTED: similar to zinc finger protein 35 [Acyrthosiphon pisum] |
NCBI nr blastp | gi|344291972 | 3e-36 | 46.53% | PREDICTED: hypothetical protein LOC100656043 [Loxodonta africana] |
NCBI nr blastx | gi|344269604 | 5e-40 | 49.66% | PREDICTED: zinc finger protein 160-like [Loxodonta africana] |
Group | ||||
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Gene Ontology | GO:0003676 | 1e-13 | nucleic acid binding | |
GO:0008270 | 2.1e-05 | zinc ion binding | ||
GO:0005622 | 2.1e-05 | intracellular | ||
KEGG pathway |   | |||
InterPro domain | [120-146] IPR013087 | 1e-13 | Zinc finger, C2H2-type/integrase, DNA-binding | |
Orthology group | MCL21055 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215116-TA
ATGTCAGATCTAACTGAAGAGCCAGCTGAAGAAATTGTGATTAAATGCGAAGTTATTGAAATATCAGACGAGGATGATTCACAGGAAATAAAAAAAAAGCGGCGGAAGCGTTTAACGTCAAAAGAGCCAAAGCCATGTGATATTTGCGGTAAAATTTTCCAAACTGGTTATGAGTTGAAGAAACACAAACGGACACACACTGGGGAGAGGCCGTATATGTGCACAACTTGCGGGAAGACATACACACAGCTCGGGCATTTGAGTATACACAGCTTGTCGCATAAAGGTATAAAGAATTTCAATTGCAACGCTTGCGGTTCGTCCTTCTACAGGAAGGCAGATTTGGATAGGCACGAAAAAATACATACAGGTGAGAAGCCATACCAATGCGAACTCTGCTCGAAAAGTTTCACCCAAAAAAATAATCTAGTTATGCATTTCAAAATGCACATCGGCGACAAACCGCACAAGTGCGACGTCTGCGACAAGAGGTTCCTGACTAGATCAAAGATGATGTTGCATTCTAAAAAACACGAAAAGGAGAAAAAGAAAAAAGATTTTATTATGGACTAG
>DPOGS215116-PA
MSDLTEEPAEEIVIKCEVIEISDEDDSQEIKKKRRKRLTSKEPKPCDICGKIFQTGYELKKHKRTHTGERPYMCTTCGKTYTQLGHLSIHSLSHKGIKNFNCNACGSSFYRKADLDRHEKIHTGEKPYQCELCSKSFTQKNNLVMHFKMHIGDKPHKCDVCDKRFLTRSKMMLHSKKHEKEKKKKDFIMD-