| DPOGS215156 | ||
|---|---|---|
| Transcript | DPOGS215156-TA | 762 bp |
| Protein | DPOGS215156-PA | 253 aa |
| Genomic position | DPSCF300348 + 26031-29295 | |
| RNAseq coverage | 559x (Rank: top 23%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017375 | 2e-130 | 85.38% | |
| Bombyx | BGIBMGA013923-TA | 5e-121 | 79.84% | |
| Drosophila | mRpL24-PA | 6e-87 | 61.66% | |
| EBI UniRef50 | UniRef50_Q9VMY1 | 7e-85 | 61.66% | Probable 39S ribosomal protein L24, mitochondrial n=30 Tax=Coelomata RepID=RM24_DROME |
| NCBI RefSeq | XP_317046.2 | 2e-95 | 66.01% | AGAP008405-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastp | gi|58389458 | 3e-94 | 66.01% | AGAP008405-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastx | gi|157131921 | 3e-94 | 66.01% | mitochondrial ribosomal protein L24 [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1.7e-72 | ribosome | |
| GO:0006412 | 1.7e-72 | translation | ||
| GO:0005622 | 1.7e-72 | intracellular | ||
| GO:0003735 | 1.7e-72 | structural constituent of ribosome | ||
| KEGG pathway | ngr:NAEGRDRAFT_4979 | 1e-17 | ||
| K02895 (RP-L24, rplX) | maps-> | Ribosome | ||
| InterPro domain | [10-253] IPR003256 | 1.7e-72 | Ribosomal protein L24 | |
| [88-187] IPR008991 | 1.4e-23 | Translation protein SH3-like | ||
| [83-176] IPR014723 | 3e-15 | Ribosomal protein L24, SH3-like | ||
| Orthology group | MCL14221 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215156-TA
ATGCGAATATATAGTTATTTATGTAAAAAAGTTGGAGATTTAACTGTTAAATACTCTAATCTGCCGGAGTCATACATAAAGAGAAGCTATGAACAGGTTTATTGGAGGAATCCAAAGGGATACCCACAGTACCCAGCTGCTCAAATAGCGCGGAAAAAATTTCGTTTTACTACGAACAGGCCGTGGACCTTGCAATTTGCTAGGCAAAATGAACGAGGTACTCTCAGAAAAAAGGTGTTCCTAGAACCCGTTGGAGAGTGGAAGTTTTTCAAGGGTGACCGAGTAGAAGTAATGGTTGGTAAAGATAAAGGAAAACAAGGTCTCATATGCCAAGTGATTCAAGAGAGGAATTGGGTCATAGTTGAAGGTTTGAACACACATTATAGAGTGGTTGGTAAAGAGAAAGATTTTCCCGGTATAACGATACAATCTGAGGCTCCGTTGCTAGTTACAACGGGTGTTAAGCTCGTTGATCCTGAAACATTGAAAGCAACGGAAGTCGAGTGGAGATTTACAGAAGAAGGTGAAAAGGTGCGTGTGTCAACGGTCACTGGTCGTATCATACCAATACCAAAAGCCGCTGAAGAAACTGTTGATTACAAGAGTAAAGAACTCTACGTAGAGAATGAAGCCAAGGACACAGCGGCCAGTGATGTTACTAAGATAACTTTTCAACCGAAATTATGTACATTTGAAATGGATATAATGGAAAGTATGGGAATTAAAGAGGACAGAGTGCCGGCCAAGTCTTACTGGTATTGA
>DPOGS215156-PA
MRIYSYLCKKVGDLTVKYSNLPESYIKRSYEQVYWRNPKGYPQYPAAQIARKKFRFTTNRPWTLQFARQNERGTLRKKVFLEPVGEWKFFKGDRVEVMVGKDKGKQGLICQVIQERNWVIVEGLNTHYRVVGKEKDFPGITIQSEAPLLVTTGVKLVDPETLKATEVEWRFTEEGEKVRVSTVTGRIIPIPKAAEETVDYKSKELYVENEAKDTAASDVTKITFQPKLCTFEMDIMESMGIKEDRVPAKSYWY-