MonarchBase - Protein-coding gene

DPOGS215212
Transcript	DPOGS215212-TA	1071 bp
Protein	DPOGS215212-PA	356 aa
Genomic position	DPSCF300143 + 152245-156288
RNAseq coverage	313x (Rank: top 36%)

Annotation
*Heliconius*	HMEL003872	1e-145	69.75%
*Bombyx*	BGIBMGA008718-TA	3e-104	56.49%
*Drosophila*	CG5147-PA	9e-26	28.27%
EBI UniRef50	UniRef50_B0WKN9	1e-39	34.16%	DNA-directed RNA polymerase III subunit D n=4 Tax=Culicidae RepID=B0WKN9_CULQU
NCBI RefSeq	XP_001659518.1	2e-43	34.28%	hypothetical protein AaeL_AAEL008794 [Aedes aegypti]
NCBI nr blastp	gi\|157119811	3e-42	34.28%	hypothetical protein AaeL_AAEL008794 [Aedes aegypti]
NCBI nr blastx	gi\|157119811	2e-42	33.71%	hypothetical protein AaeL_AAEL008794 [Aedes aegypti]

Group
Gene Ontology	GO:0003899	1.7e-27	DNA-directed RNA polymerase activity
	GO:0003677	1.7e-27	DNA binding
	GO:0005666	1.7e-27	DNA-directed RNA polymerase III complex
	GO:0006383	1.7e-27	transcription from RNA polymerase III promoter
KEGG pathway	aag:AaeL_AAEL008794	5e-43
	K03026 (RPC4)	maps->	Cytosolic DNA-sensing pathway
			Purine metabolism
			Pyrimidine metabolism
			RNA polymerase
InterPro domain	[20-356] IPR007811	1.7e-27	RNA polymerase III Rpc4
Orthology group	MCL15900		Insect specific

Nucleotide sequence:

>DPOGS215212-TA
ATGTCCAATTCCGGTGACAAACCAAACGCAAATGGTGTCAACACGGATCCTCTACAGAGACTAGCTTCGTTTAAGGCCCCAAGAGACCTATCACTAGGTGGATTAAAGCCAAATAAAAAAATCTTCACTCCAAACTTAAATGTAACTAGGAATAAAAATAAAGGTGCTTCGTCAACAAGTAATCGTGATTCTAAAAAAGATGAGAGAAACAGACGGGATCGCAAGAACGATAAAAATAAGAACTTCAAAAACGGACCAAATATTATAAAGTCCAGCGGAGTATTCTCTGAAGGTCTGGGTAGTGCTGAACGACATCACTCCAGTAGGGTGTCCTATGGACGTGACGTTGATTCCTCACACACTCTCCAAAAACCTACACTAAGGGTCAAGGATGTAGTAAAGATAGATAAAGAGTTGGAGGAACAGAAAATCCAAGAGGCTTTTGGTGAGAACAATGCTTTTGATGATGAAGGAGAAGACTTCAAACAGGTGTTGGACATTGAAGCTCCTATCAAGTTACCCATGGACGACGGAAGCATTAAGCAATTAAAAGCCGCTGTGAAGATAAAAAATGAGGTGATAGTGAAACAGGAGCCGAGCGAGGAAGCATCTACGGCTGTGTTGGAACAGAAGCCCTTGGCTGATGTGAAGGAAGTGTATGAAGATTCGAGTGTTATGAACCTGTTGCGGAGTGACAAACCAACACTCATATTGTTACAGTTAGCCGACTCCCTGCCGGGCAGAGGTGGTGCTAGTGATGATAGGAAACATGAGCCTGGGACGTCTGAGGCTGCGGAACAAGAAACTGATAGCAGATGTCACCTGACTGATCTCGAGGAAGGAAGAATAGGGAAGATGAGGATACACAGGTCCGGCAGGGTCACCATGGCCTTAGGAGATACGATATTTGAGGTGAGTGCTGGCACTAAAGCCTCCTTCCACCAGGAGGTCGTGTCGGTAGGAGTGGATGAAGCGTCCCGTTCCGCGAGCCTGGTCTCCTTGGGTCCCCTTCATCACAAACTGAACATAACACCGCACTGGCAGTCAATGTTCAATAAAATGTCCGTGTGA

Protein sequence:

>DPOGS215212-PA
MSNSGDKPNANGVNTDPLQRLASFKAPRDLSLGGLKPNKKIFTPNLNVTRNKNKGASSTSNRDSKKDERNRRDRKNDKNKNFKNGPNIIKSSGVFSEGLGSAERHHSSRVSYGRDVDSSHTLQKPTLRVKDVVKIDKELEEQKIQEAFGENNAFDDEGEDFKQVLDIEAPIKLPMDDGSIKQLKAAVKIKNEVIVKQEPSEEASTAVLEQKPLADVKEVYEDSSVMNLLRSDKPTLILLQLADSLPGRGGASDDRKHEPGTSEAAEQETDSRCHLTDLEEGRIGKMRIHRSGRVTMALGDTIFEVSAGTKASFHQEVVSVGVDEASRSASLVSLGPLHHKLNITPHWQSMFNKMSV-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: