DPOGS215345 | ||
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Transcript | DPOGS215345-TA | 546 bp |
Protein | DPOGS215345-PA | 181 aa |
Genomic position | DPSCF300120 + 458894-459857 | |
RNAseq coverage | 36x (Rank: top 74%) |
Annotation | ||||
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Heliconius | HMEL014737 | 2e-12 | 36.08% |   |
Bombyx | BGIBMGA007978-TA | 1e-57 | 71.83% |   |
Drosophila | snRNP-U1-70K-PA | 9e-13 | 36.46% |   |
EBI UniRef50 | UniRef50_B7Q3Z6 | 2e-50 | 61.25% | U1 small nuclear ribonucleoprotein, putative n=3 Tax=Coelomata RepID=B7Q3Z6_IXOSC |
NCBI RefSeq | XP_966565.1 | 1e-51 | 61.63% | PREDICTED: similar to U11/U12 snRNP 35K [Tribolium castaneum] |
NCBI nr blastp | gi|91086635 | 2e-50 | 61.63% | PREDICTED: similar to U11/U12 snRNP 35K [Tribolium castaneum] |
NCBI nr blastx | gi|91086635 | 3e-51 | 63.31% | PREDICTED: similar to U11/U12 snRNP 35K [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0000166 | 3.2e-23 | nucleotide binding | |
GO:0003676 | 5.6e-21 | nucleic acid binding | ||
KEGG pathway |   | |||
InterPro domain | [49-148] IPR012677 | 3.2e-23 | Nucleotide-binding, alpha-beta plait | |
[55-128] IPR000504 | 5.6e-21 | RNA recognition motif domain | ||
Orthology group | MCL16492 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215345-TA
ATGTTTGACAAAGATTTTACCAAATATGCAACGACGACATATGATCCAATAAAAATAGGTTCAATAGACGGTACTGACACTGCTCCTCATGACCATGGGATTGTAAGAGCACTGAACTCTGAGTATGTTCCGAATAAAAAAGTTAAAGGTGATCCCAATCATACTATATTTGTCGCCAGACTGAACCCGAGGACGACAGAGGATACAATATATTCAGAATTTTCAAAATTTGGAAAAGTGATCAACTGCAGACTTGTGAAGGACATAGTGACTGGAAAATCAAAGCAGTATGCTTTCGTAGAATATGAGAACTTGTCTAGTTTGGATGGAGCTTTAAAGGATATGAACAATGAATATTTAGATAGTTTTGAGATCATAGTGGAGCGGGAAGCAGAAAGGCGTCTCAGAGGGTGGAGGCCGAGACGGCTCGGGGGAGGATTCGGGGGTCGGAAGGAATCTGGGCAGCTGAGATTTGGATGCAGAGAAAGACCCTTCAGAAAACCAATAGTAATTAATCCTAAAAATGTCAAAGTAGAACCTAAATAG
>DPOGS215345-PA
MFDKDFTKYATTTYDPIKIGSIDGTDTAPHDHGIVRALNSEYVPNKKVKGDPNHTIFVARLNPRTTEDTIYSEFSKFGKVINCRLVKDIVTGKSKQYAFVEYENLSSLDGALKDMNNEYLDSFEIIVEREAERRLRGWRPRRLGGGFGGRKESGQLRFGCRERPFRKPIVINPKNVKVEPK-