DPOGS215396 | ||
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Transcript | DPOGS215396-TA | 873 bp |
Protein | DPOGS215396-PA | 290 aa |
Genomic position | DPSCF300088 + 252889-256016 | |
RNAseq coverage | 0x (Rank: top 99%) |
Annotation | ||||
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Heliconius | HMEL003676 | 1e-77 | 49.65% |   |
Bombyx | BGIBMGA012431-TA | 2e-116 | 66.32% |   |
Drosophila | CG10026-PB | 2e-38 | 32.64% |   |
EBI UniRef50 | UniRef50_E2C3S6 | 4e-47 | 35.59% | Retinaldehyde-binding protein 1-like protein 1 n=10 Tax=Formicidae RepID=E2C3S6_HARSA |
NCBI RefSeq | XP_001606243.1 | 2e-50 | 37.15% | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] |
NCBI nr blastp | gi|383864586 | 2e-49 | 39.69% | PREDICTED: alpha-tocopherol transfer protein-like [Megachile rotundata] |
NCBI nr blastx | gi|345494155 | 5e-48 | 37.37% | PREDICTED: alpha-tocopherol transfer protein-like isoform 1 [Nasonia vitripennis] |
Group | ||||
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Gene Ontology | GO:0006810 | 1e-09 | transport | |
GO:0005622 | 1e-09 | intracellular | ||
GO:0005215 | 1e-09 | transporter activity | ||
KEGG pathway |   | |||
InterPro domain | [121-281] IPR001251 | 1.1e-31 | Cellular retinaldehyde-binding/triple function, C-terminal | |
[20-100] IPR011074 | 4.8e-12 | Phosphatidylinositol transfer protein-like, N-terminal | ||
[61-83] IPR001071 | 1e-09 | Cellular retinaldehyde binding/alpha-tocopherol transport | ||
Orthology group | MCL23367 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215396-TA
ATGCCATTCCAAGAAATAGCCTTCCGCGCGGAACTTGACCGCCATGAGGATCCAGAGTTCGAGTACCAGGCGAGCATACTCTGTGAGGAGGACGCCGCGGCGCGCGCCGACCGCGTACAGCTACTGAGGAATATGATTTATGAGCGTGGGGAGTGTGTCCCACCTCGTATGGACGACGCGTTCTTGTTGAGATTCCTCCGCGCTCGTCGCTCCATACCCGCGCGCGCGCACCGCCTCATGGTTCGTTATTGTAAATTCCGTGAGCAGCATCCTCATCTGTGGAAAAACGTCTATTGGTACAGCTTGTCGAAGCTGGGTGAAACCTTCGAGGGAGTTCTCTTTGACAGACCGGATGTCGGAAGACTTATTATATGCCGTTTAGGTCAATGGAACCCGGACATATACCCCGCTGACGATCTCATTCGCGGTTGTCTCTTGTCCCTGGAGATAGGCATCATGCAACCGAAGCTCCAGGTTCTAGGCGGAACAGCTATAGTAGACTGCGAGGGGATCACCATGAAGCATATGAGACAGTTGTCACCGTCGATTGCTGTTCAAGCTATGAATATCATGGGGTTCTCGTTTCCTCTCCACCAACGCGGTGTTCACATCGTGAACTGCTCGCGGTGGTTCGAGAAACTGTTCCATTTGTTGAAACGTTTCGCTCCTGCTGACGAGTTGTGGAGGAAGGTCTACTTCCATGGATACGAGTATACATCTTTACATAGGTACATCGACCCCGAGTGCCTCCCAAAGAGATACGGCGGCCACCGCGAGTCCGTCTCGGTTAGAGATTGGCTCACAAAAATAAAACAGTATAAGAACAAACAGTTCGACGACGACATCAGCTGTTTGGGATATGCCATAGATTAA
>DPOGS215396-PA
MPFQEIAFRAELDRHEDPEFEYQASILCEEDAAARADRVQLLRNMIYERGECVPPRMDDAFLLRFLRARRSIPARAHRLMVRYCKFREQHPHLWKNVYWYSLSKLGETFEGVLFDRPDVGRLIICRLGQWNPDIYPADDLIRGCLLSLEIGIMQPKLQVLGGTAIVDCEGITMKHMRQLSPSIAVQAMNIMGFSFPLHQRGVHIVNCSRWFEKLFHLLKRFAPADELWRKVYFHGYEYTSLHRYIDPECLPKRYGGHRESVSVRDWLTKIKQYKNKQFDDDISCLGYAID-