DPOGS215399 | ||
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Transcript | DPOGS215399-TA | 900 bp |
Protein | DPOGS215399-PA | 299 aa |
Genomic position | DPSCF300088 + 271823-275977 | |
RNAseq coverage | 16x (Rank: top 81%) |
Annotation | ||||
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Heliconius | HMEL003676 | 1e-79 | 48.44% |   |
Bombyx | BGIBMGA012432-TA | 9e-109 | 63.19% |   |
Drosophila | CG10026-PB | 2e-42 | 34.15% |   |
EBI UniRef50 | UniRef50_D6WK77 | 3e-47 | 36.50% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WK77_TRICA |
NCBI RefSeq | XP_001606243.1 | 1e-51 | 37.86% | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] |
NCBI nr blastp | gi|345494153 | 4e-50 | 38.10% | PREDICTED: alpha-tocopherol transfer protein-like isoform 2 [Nasonia vitripennis] |
NCBI nr blastx | gi|345494155 | 1e-50 | 37.86% | PREDICTED: alpha-tocopherol transfer protein-like isoform 1 [Nasonia vitripennis] |
Group | ||||
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Gene Ontology | GO:0006810 | 2.3e-15 | transport | |
GO:0005622 | 2.3e-15 | intracellular | ||
GO:0005215 | 2.3e-15 | transporter activity | ||
KEGG pathway |   | |||
InterPro domain | [95-282] IPR001251 | 3.1e-36 | Cellular retinaldehyde-binding/triple function, C-terminal | |
[61-83] IPR001071 | 2.3e-15 | Cellular retinaldehyde binding/alpha-tocopherol transport | ||
[6-91] IPR011074 | 1.4e-14 | Phosphatidylinositol transfer protein-like, N-terminal | ||
Orthology group | MCL30926 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215399-TA
ATGCCGTTCATAGACATAGCGTTCCAGGCTGAAGTCAGCAGGTTTGAGGACCAGGAGTTCGAGGAGTGCGCCAGGAGGAACTGCTCCGAGGACCCAGAGACCAGGCAGACAGCCATTCACAACCTACGGAACCTTATATACCAACGTGGTGAGTGTAATCCGAGAAGACTAGACGACGCGTACCTCCTGCGATTCCTGAGATGCAGGAGATTCATACCAGCTCTGGCACACAAACTGATTGTCCGATACGAAGAGTTCCGTCGCAAGAACTCCTACTTGTATGACTGCAAGGCCTTCGGTCTCCAGAAGGTGAAGGGGGTATACGGAGGCACCCTGCCGGAGAGTCCGCACCACGGCAGGATCACACTCATGAGGTTCGGTCGTTGGGACACGGAAGCCGTCCCCGTGGTGGACGTGGTCCGTTGCGCTCTGCTGATGGACGAGATCGCGGTCATGCAGCCCAAATTACAAATCCTAGGCGTCACCATCATAGTCGACCTCGAGGGTCTCAGTGTGAGACATGTCAGACACCTCACACCCACTATAGCGCATCAGATCGTCAGCCTCATGGGGGTGTCCTTCCCCCTGCTGCTGCACGGCCTCCATATAGTCCGCTACAACTGGATCCTGAACACTTTCTTCTACGTGTTCAAGCAGTTCATACCGACTGCGGCCTGGGAGAGGGTCCATTTCCACGGACACGACATGGCCTCCCTCCACAGACACATACCCCCCGAGTACCTCCCGCCGGAGTACGGGGGCTGCTGCCCTCACGTGGTGGAGGTCGACGAGTGGGTCAGGAAGGTCGACAGGTTCAAGGACGACTTCATGGTCAACGAGCTCAGGGAGCTGGGCTTCACCGTCGACGATCAGCAGTATAATAAATTATATGAAATATGA
>DPOGS215399-PA
MPFIDIAFQAEVSRFEDQEFEECARRNCSEDPETRQTAIHNLRNLIYQRGECNPRRLDDAYLLRFLRCRRFIPALAHKLIVRYEEFRRKNSYLYDCKAFGLQKVKGVYGGTLPESPHHGRITLMRFGRWDTEAVPVVDVVRCALLMDEIAVMQPKLQILGVTIIVDLEGLSVRHVRHLTPTIAHQIVSLMGVSFPLLLHGLHIVRYNWILNTFFYVFKQFIPTAAWERVHFHGHDMASLHRHIPPEYLPPEYGGCCPHVVEVDEWVRKVDRFKDDFMVNELRELGFTVDDQQYNKLYEI-