DPOGS215463 | ||
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Transcript | DPOGS215463-TA | 555 bp |
Protein | DPOGS215463-PA | 184 aa |
Genomic position | DPSCF300098 - 452059-452989 | |
RNAseq coverage | 471x (Rank: top 26%) |
Annotation | ||||
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Heliconius | HMEL008348 | 1e-78 | 74.86% |   |
Bombyx | BGIBMGA007493-TA | 3e-50 | 67.91% |   |
Drosophila | TFAM-PB | 9e-29 | 36.36% |   |
EBI UniRef50 | UniRef50_Q2F674 | 4e-65 | 69.59% | Transcription factor A n=2 Tax=Obtectomera RepID=Q2F674_BOMMO |
NCBI RefSeq | XP_002072195.1 | 3e-30 | 38.07% | GK22718 [Drosophila willistoni] |
NCBI nr blastp | gi|87248181 | 1e-64 | 69.59% | transcription factor A [Bombyx mori] |
NCBI nr blastx | gi|87248181 | 7e-68 | 68.16% | transcription factor A [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005515 | 5.9e-17 | protein binding | |
GO:0003677 | 1.3e-16 | DNA binding | ||
KEGG pathway | dwi:Dwil_GK22718 | 7e-30 |   | |
  | K11830 (TFAM, MTTFA) | maps-> | Huntington's disease | |
InterPro domain | [79-184] IPR009071 | 5.9e-17 | High mobility group, superfamily | |
[90-181] IPR000910 | 1.3e-16 | High mobility group, HMG1/HMG2 | ||
Orthology group | MCL12802 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215463-TA
ATGGGTCAAATGAGACCAGCCCTGTTAGCTAAGAATCCCGGTATAAGTTCCAAAGAAGCCATATCATGGAGTTCAAAACATTGGCAGCAACTTGACAGTGAGACCAAGTCACAAATGTTGAAAGAGTATGAGAAAGATTTAGAGGACTATAAAAAGATTAAGGCAATATATGAGTCATCACTCACAGACCAACAAAAAGAAGACATCCAGAAAATGAAAGAAGACATGGTTGCAGCTAAAGAAAAACGCAAATTAAAAGCTGAATATAAAGAATTGGGGCGGCCAAAGAAACCTATGTCCTCCTACTTCCTATTCTGCCAAACTAAAAAGGATTTATTTAAGGGACAGAAAATACAAGAATTTCAGACTACATTAAAAGCTGAATGGGTTAAACTTTCTGATAGTGAAAGAGTGAAGTATGAAAAACAGGCACAGGAGCTTATGAATAAATATAGAAAAGATTTACAGGCATGGGAACTGAAGATGATATCGATCGGACGATCAGATCTTGTTAAAGAGAAACCAGTTAGGTCCAAATCAAAATCTTCACAATAG
>DPOGS215463-PA
MGQMRPALLAKNPGISSKEAISWSSKHWQQLDSETKSQMLKEYEKDLEDYKKIKAIYESSLTDQQKEDIQKMKEDMVAAKEKRKLKAEYKELGRPKKPMSSYFLFCQTKKDLFKGQKIQEFQTTLKAEWVKLSDSERVKYEKQAQELMNKYRKDLQAWELKMISIGRSDLVKEKPVRSKSKSSQ-