| DPOGS215560 | ||
|---|---|---|
| Transcript | DPOGS215560-TA | 597 bp |
| Protein | DPOGS215560-PA | 198 aa |
| Genomic position | DPSCF300097 - 356024-357497 | |
| RNAseq coverage | 484x (Rank: top 26%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016910 | 7e-92 | 90.40% | |
| Bombyx | BGIBMGA000360-TA | 4e-83 | 89.39% | |
| Drosophila | CG11586-PA | 1e-68 | 68.18% | |
| EBI UniRef50 | UniRef50_Q96NC0 | 2e-55 | 60.51% | Zinc finger matrin-type protein 2 n=44 Tax=Eumetazoa RepID=ZMAT2_HUMAN |
| NCBI RefSeq | XP_001956139.1 | 5e-68 | 68.18% | GF24743 [Drosophila ananassae] |
| NCBI nr blastp | gi|194747399 | 9e-67 | 68.18% | GF24743 [Drosophila ananassae] |
| NCBI nr blastx | gi|110757559 | 1e-79 | 73.23% | PREDICTED: zinc finger matrin-type protein 2-like [Apis mellifera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008270 | 1e-10 | zinc ion binding | |
| GO:0003676 | 1e-10 | nucleic acid binding | ||
| KEGG pathway | dan:Dana_GF24743 | 1e-67 | ||
| K12848 (SNU23) | maps-> | Spliceosome | ||
| InterPro domain | [75-109] IPR003604 | 1e-10 | Zinc finger, U1-type | |
| [78-103] IPR022755 | 1.2e-06 | Zinc finger, double-stranded RNA binding | ||
| Orthology group | MCL12202 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215560-TA
ATGAGTATGAGGCCAGATGATCATCGACGAAAATGGGACAAGGAGGAATTTGAGAGAATCGCATTTGAAAGATTACAAGCCGAATTAGACGAAGAAGAAAATGCTAAAAAGAAACCTGCACCAGTCAAAAGGGAACTTCTAAAGCAACGAGAATACAAAGTTGATTTAGATTCTAAATTGGGAAAGAGTGTGGTTATCACTAAAAACACTCCCACCTCACAATCCGGAGGTTACTATTGTAATGTTTGTGATTGTGTGGTTAAGGATTCAATTAATTTCTTGGATCATATCAATGGCAAAAAACATCAAAGAAACCTTGGCATGTCCATGAAAATAGAGAGAAGCAGCTTAGAACAGGTAAAGGCGAGATTTGCACTAAACAAGCGTAAATTGGAAGAGAAGAAGAGTGAGTATGAACTTGACACGAGGTTAAAAGAAGCTGCCGAAGAGGAAGCCAGGCTGAAGGAGTTGCGACGCGAGAGACGGAGAGACAAGAAACGCAAGTTACAAGAAACTGAAGAACCAGAGGATGGCCCGGCTCAGTCTGAGCTAGCCCAAATTATGGGATTTTCTGGCTTTGGGGCCTCCAAAAAGTAG
>DPOGS215560-PA
MSMRPDDHRRKWDKEEFERIAFERLQAELDEEENAKKKPAPVKRELLKQREYKVDLDSKLGKSVVITKNTPTSQSGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKIERSSLEQVKARFALNKRKLEEKKSEYELDTRLKEAAEEEARLKELRRERRRDKKRKLQETEEPEDGPAQSELAQIMGFSGFGASKK-