DPOGS215665 | ||
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Transcript | DPOGS215665-TA | 357 bp |
Protein | DPOGS215665-PA | 118 aa |
Genomic position | DPSCF300041 - 1290628-1291431 | |
RNAseq coverage | 2849x (Rank: top 4%) |
Annotation | ||||
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Heliconius | HMEL014135 | 5e-46 | 75.42% |   |
Bombyx | BGIBMGA003562-TA | 1e-58 | 87.29% |   |
Drosophila | CG6463-PA | 5e-41 | 63.48% |   |
EBI UniRef50 | UniRef50_G3MHM1 | 2e-37 | 63.16% | Putative uncharacterized protein (Fragment) n=1 Tax=Amblyomma maculatum RepID=G3MHM1_9ACAR |
NCBI RefSeq | NP_001093287.1 | 5e-56 | 85.59% | NADH dehydrogenase 1 alpha subcomplex subunit 5 [Bombyx mori] |
NCBI nr blastp | gi|153792038 | 1e-54 | 85.59% | NADH dehydrogenase 1 alpha subcomplex subunit 5 [Bombyx mori] |
NCBI nr blastx | gi|153792038 | 5e-55 | 85.59% | NADH dehydrogenase 1 alpha subcomplex subunit 5 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0016651 | 2.8e-23 | oxidoreductase activity, acting on NADH or NADPH | |
GO:0022904 | 2.8e-23 | respiratory electron transport chain | ||
GO:0005743 | 2.8e-23 | mitochondrial inner membrane | ||
KEGG pathway | tca:100142590 | 5e-42 |   | |
  | K03949 (NDUFA5) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [18-73] IPR006806 | 2.8e-23 | ETC complex I subunit | |
Orthology group | MCL15729 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215665-TA
ATGGGAGTAATAAAGAAGACTACGGGTCTTGTGGGTTTAGCAGTTGCTGCGAACCCACATCACACACTCGGATCTTTGTATGGGAAAATACTACGTACCATACAAAAGATGCCAGAAACATCTGTATATAGAAAATATACCGAACAAATCGTCAAGGAGAGAGCCGCTGTGTTAAAGCAGACTAAGGATGTTTATGAAATTGAAACCAAAATCAACTGTGGGCAAGCTGAAGAACTTATCATCCAGGCAGAGAATGAGTTGAACTTGGCTCGTAAAATGTTAATCTGGAAGCCTTGGGAACCTCTTGTTGCTAAGCCACCAAAGGGCCAATGGGATTGGCCGCCGACCAAGTCATAA
>DPOGS215665-PA
MGVIKKTTGLVGLAVAANPHHTLGSLYGKILRTIQKMPETSVYRKYTEQIVKERAAVLKQTKDVYEIETKINCGQAEELIIQAENELNLARKMLIWKPWEPLVAKPPKGQWDWPPTKS-