DPOGS215755 | ||
---|---|---|
Transcript | DPOGS215755-TA | 363 bp |
Protein | DPOGS215755-PA | 120 aa |
Genomic position | DPSCF300041 + 1288594-1289377 | |
RNAseq coverage | 179x (Rank: top 50%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL014136 | 5e-68 | 99.17% |   |
Bombyx | BGIBMGA003632-TA | 3e-67 | 97.50% |   |
Drosophila | CG3402-PA | 4e-60 | 85.83% |   |
EBI UniRef50 | UniRef50_Q9W0P4 | 7e-58 | 85.83% | CG3402 n=28 Tax=Pancrustacea RepID=Q9W0P4_DROME |
NCBI RefSeq | XP_002428217.1 | 3e-64 | 95.00% | conserved hypothetical protein [Pediculus humanus corporis] |
NCBI nr blastp | gi|242015111 | 7e-63 | 95.00% | conserved hypothetical protein [Pediculus humanus corporis] |
NCBI nr blastx | gi|242015111 | 1e-61 | 95.00% | conserved hypothetical protein [Pediculus humanus corporis] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005515 | 1.2e-16 | protein binding | |
KEGG pathway | mmu:59079 | 2e-07 |   | |
  | K12796 (ERBB2IP, ERBIN) | maps-> | NOD-like receptor signaling pathway | |
InterPro domain | [37-117] IPR001478 | 1.2e-16 | PDZ/DHR/GLGF | |
Orthology group | MCL12226 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS215755-TA
ATGGCTTTTCAACACCAAGCCGGCACGGCTATGGAATGCCTCAGTATTCCAATTACACTTCAAAAGGAAGCTGGCGTAGACGCTGAAGGTCGAGAAGTAATGAAATGTGGTTTCAAAATAGGTGGCGGAATTGATCAAGATTTCCGTAAAAGTCCTCAGGGATACACTGACAATGGTATCTATGTAACAGAAGTGCATGAAGGGAGCCCAGCGGCAAAGTCAGGATTAAGAATGCATGATAAAATTCTCCAGTGCAACGGCTACGACTTCACCATGGTAACACATAAAAAGGCCGTCAGCTACATAAAAAAACATCCTGTACTTAACTTACTTGTAGCAAGAAAAGGAGTCACATCCACATAA
>DPOGS215755-PA
MAFQHQAGTAMECLSIPITLQKEAGVDAEGREVMKCGFKIGGGIDQDFRKSPQGYTDNGIYVTEVHEGSPAAKSGLRMHDKILQCNGYDFTMVTHKKAVSYIKKHPVLNLLVARKGVTST-