Monarch geneset OGS2.0

DPOGS215921
TranscriptDPOGS215921-TA1488 bp
ProteinDPOGS215921-PA495 aa
Genomic positionDPSCF300029 + 703766-708644
RNAseq coverage2935x (Rank: top 4%)
Annotation
HeliconiusHMEL0078360.087.76% 
BombyxBGIBMGA000292-TA0.086.90% 
DrosophilaCG7430-PA0.070.18% 
EBI UniRef50UniRef50_P096220.066.10%Dihydrolipoyl dehydrogenase, mitochondrial n=442 Tax=root RepID=DLDH_HUMAN
NCBI RefSeqNP_001037054.10.086.90%dihydrolipoamide dehydrogenase [Bombyx mori]
NCBI nr blastpgi|1129830960.086.90%dihydrolipoamide dehydrogenase [Bombyx mori]
NCBI nr blastxgi|1129830960.086.90%dihydrolipoamide dehydrogenase [Bombyx mori]
Group
Gene OntologyGO:00041483.3e-244dihydrolipoyl dehydrogenase activity
GO:00506603.3e-244flavin adenine dinucleotide binding
GO:00551143.3e-244oxidation-reduction process
GO:00057371.5e-46cytoplasm
GO:00454541.5e-46cell redox homeostasis
GO:00164911.5e-46oxidoreductase activity
KEGG pathwaydmo:Dmoj_GI116960.0 
 K00382 (DLD, lpd, pdhD)maps-> Citrate cycle (TCA cycle)
    Glycolysis / Gluconeogenesis
    Glycine, serine and threonine metabolism
    Valine, leucine and isoleucine degradation
    Pyruvate metabolism
InterPro domain[23-495] IPR0062583.3e-244Dihydrolipoamide dehydrogenase
[363-488] IPR0040991.5e-46Pyridine nucleotide-disulphide oxidoreductase, dimerisation
[372-488] IPR0161565.9e-39FAD/NAD-linked reductase, dimerisation
[33-52] IPR0130273.6e-38FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[32-346] IPR0237531.9e-37Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
Orthology groupMCL12330 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS215921-TA
ATGGGATACAAATTTTTGAGGCTAGCTTCAACTTCATTCAGGAATGGAAATGTACCAATTGGTATAAGACATTACTCTTCCGCCCATGACGCCGACCTAGTGGTGATCGGGTCTGGCCCTGGTGGATATGTAGCAGCTATCAAAGCTGCACAAATGGGTTTGAAGACTATCTCTGTTGAAAAAGATCCTACCCTGGGCGGTACTTGTTTGAATGTTGGCTGTATTCCCTCAAAGGCCCTACTTCACAATTCCCACTTATATCATATGGCGAAACATGATTTTAAACACAGAGGTATTGAAGTTGGCAATATTTCTTTCAACTTTGAGGCTATGATGAAGTACAAAGAAAATGCTGTTAAAGCCCTAACTGGTGGTATCGGCATGTTGTTTAATAAGAACAAGGTTAAACTAGTTCGAGGGCATGGTTCCATTGTCGCTCCAAACAAAGTTGAAGTCAAAGGAGAGAAAGGCGTTGAAACAATTAACACAAAAAACATTATTATTGCAACTGGCTCTGTAGTTACACCCTTCCCAGGCGTCACATTTGATGAAAAACAAATAGTCTCGTCAACGGGAGCCCTATCTTTACCTAAAATGCCGAAAAAGATGTTGGTTATTGGCGCAGGAGTTATTGGTCTTGAGCTGGGTTCAGTTTACCAAAGACTGGGTGCCGATGTAACAGCCATTGAGTTCCTAGAGAATATTGGAGGGGTCGGTATCGATGGTGAGGTTTCCAAAACCCTGCATAAGATCATGTCGAAGCAAGGTATGAAATTTAAACTTGGCACCAAGGTGATGGGGATAAAGAAAGATGGGAGTACTGTGAAGGTGGACGTTGAAGCTGCTAAAGGTGGAAATAAAGAAACTTTGGATTGCGACGTGGTATTGATATCTATAGGGCGGCGCCCCTTCGTGGAGGGTCTGGGTCTAGATAAGGTCGGCATCGCACTGGACGACAGGGGCCGTGTTCCGGTCAACAACAAATTCCAAACTACCGTGCCCGGAATTTACGCGATCGGTGACGTCATCCATGGTCCCATGCTGGCTCACAAGGCTGAGGACGAGGGCATCGTTTGCGTGGAGGGGATCAAAGGTATGCCGGTACACTTCAACTACGATGCGATCCCATCGGTTATTTACACCAGCCCTGAAGTGGGTTGGGTCGGGAAAACGGAGGAGGATCTCAAGAAAGAGGGAAAAGCATACAAAGTGGGCAAATTTCCGTTCCTAGCCAATTCTCGCGCTAAAACAAACGGCGAACCAGACGGCTTCGTGAAGGTTTTGGCTGACAAGGCGACCGACGTCATACTAGGAACACATATCATTGGACCGGGAGGCGGCGAGTTGATCAACGAGGCTGTCTTGGCGCAGGAGTATGGAGCGGCCGCAGAGGACGTCGCCAGGGTCTGCCACGCGCATCCTACGTGCGCCGAGGCCTTACGAGAAGCCAACATGGCTGCGTACATTGGAAAACCAATCAATTTTTAA

Protein sequence:

>DPOGS215921-PA
MGYKFLRLASTSFRNGNVPIGIRHYSSAHDADLVVIGSGPGGYVAAIKAAQMGLKTISVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKHRGIEVGNISFNFEAMMKYKENAVKALTGGIGMLFNKNKVKLVRGHGSIVAPNKVEVKGEKGVETINTKNIIIATGSVVTPFPGVTFDEKQIVSSTGALSLPKMPKKMLVIGAGVIGLELGSVYQRLGADVTAIEFLENIGGVGIDGEVSKTLHKIMSKQGMKFKLGTKVMGIKKDGSTVKVDVEAAKGGNKETLDCDVVLISIGRRPFVEGLGLDKVGIALDDRGRVPVNNKFQTTVPGIYAIGDVIHGPMLAHKAEDEGIVCVEGIKGMPVHFNYDAIPSVIYTSPEVGWVGKTEEDLKKEGKAYKVGKFPFLANSRAKTNGEPDGFVKVLADKATDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANMAAYIGKPINF-