| DPOGS215922 | ||
|---|---|---|
| Transcript | DPOGS215922-TA | 465 bp |
| Protein | DPOGS215922-PA | 154 aa |
| Genomic position | DPSCF300029 + 721452-722330 | |
| RNAseq coverage | 334x (Rank: top 35%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007838 | 3e-66 | 68.18% | |
| Bombyx | BGIBMGA011828-TA | 2e-26 | 35.29% | |
| Drosophila | CG32262-PA | 6e-39 | 46.67% | |
| EBI UniRef50 | UniRef50_D6X0D0 | 2e-38 | 50.99% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6X0D0_TRICA |
| NCBI RefSeq | XP_968777.1 | 4e-39 | 50.99% | PREDICTED: similar to pmp22 peroxisomal membrane protein [Tribolium castaneum] |
| NCBI nr blastp | gi|91091104 | 7e-38 | 50.99% | PREDICTED: similar to pmp22 peroxisomal membrane protein [Tribolium castaneum] |
| NCBI nr blastx | gi|332374592 | 2e-38 | 49.67% | unknown [Dendroctonus ponderosae] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016021 | 4.3e-56 | integral to membrane | |
| KEGG pathway | tgu:100229975 | 1e-27 | ||
| K13348 (MPV17) | maps-> | Peroxisome | ||
| InterPro domain | [1-149] IPR007248 | 4.3e-56 | Mpv17/PMP22 | |
| Orthology group | MCL14939 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215922-TA
ATGACTATTGGTGATGTTGTACAACAAGAATTTGAGTATCAAACCAATGTAATACATACCAGATATGATTGGGACAGGGCAGCAAGAATGTTTGTAGTGGGTACGGCTATGGGTCCAGTACATCACTACTATTATCACTATTTAGACAAATTACTACCTGAGATAAGCTTAAAAACTGTTGGGAAAAAGATATTGAGTGATCAGTTGCTAGCGTCGCCTTCAACAATTCTATGCTTTTACTATGGTATGGGTTTTTTAGAAAGGAAAACTTTCAAGGAATCCACTGAAGAAATCAAACAAAAAATTAAATTAACTTATATGGGGGATTGTTTGTTCTGGCCTCCTGTACAGTTTTTGAATTTTTACTACTTACCATCACACTACAGGGTATTTTATATAAACTTTGCAACAATGATATATAATGTGTTTTTGTCGTATATGAAACATTATGATCAGCACAAATAA
>DPOGS215922-PA
MTIGDVVQQEFEYQTNVIHTRYDWDRAARMFVVGTAMGPVHHYYYHYLDKLLPEISLKTVGKKILSDQLLASPSTILCFYYGMGFLERKTFKESTEEIKQKIKLTYMGDCLFWPPVQFLNFYYLPSHYRVFYINFATMIYNVFLSYMKHYDQHK-