| DPOGS215926 | ||
|---|---|---|
| Transcript | DPOGS215926-TA | 603 bp |
| Protein | DPOGS215926-PA | 200 aa |
| Genomic position | DPSCF300029 + 1210447-1212260 | |
| RNAseq coverage | 189x (Rank: top 48%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011807 | 2e-85 | 98.68% | |
| Bombyx | BGIBMGA000295-TA | 2e-116 | 98.50% | |
| Drosophila | Rab3-PA | 3e-108 | 90.00% | |
| EBI UniRef50 | UniRef50_Q96E17 | 1e-92 | 81.50% | Ras-related protein Rab-3C n=91 Tax=Bilateria RepID=RAB3C_HUMAN |
| NCBI RefSeq | NP_001037620.1 | 6e-115 | 98.50% | ras-related GTP-binding protein Rab3 [Bombyx mori] |
| NCBI nr blastp | gi|112983326 | 1e-113 | 98.50% | ras-related GTP-binding protein Rab3 [Bombyx mori] |
| NCBI nr blastx | gi|112983326 | 1e-109 | 98.50% | ras-related GTP-binding protein Rab3 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 1e-97 | small GTPase mediated signal transduction | |
| GO:0005525 | 1e-97 | GTP binding | ||
| GO:0015031 | 1e-97 | protein transport | ||
| GO:0016020 | 1.7e-31 | membrane | ||
| GO:0007165 | 1.7e-31 | signal transduction | ||
| GO:0006184 | 1.7e-31 | GTP catabolic process | ||
| GO:0003924 | 1.7e-31 | GTPase activity | ||
| GO:0005622 | 9.1e-15 | intracellular | ||
| GO:0006886 | 5.5e-05 | intracellular protein transport | ||
| GO:0006913 | 5.5e-05 | nucleocytoplasmic transport | ||
| KEGG pathway | ||||
| InterPro domain | [2-165] IPR003579 | 1e-97 | Small GTPase superfamily, Rab type | |
| [3-162] IPR001806 | 1e-62 | Small GTPase superfamily | ||
| [2-165] IPR020849 | 1.7e-31 | Small GTPase superfamily, Ras type | ||
| [2-156] IPR005225 | 2.3e-26 | Small GTP-binding protein domain | ||
| [4-165] IPR003578 | 9.1e-15 | Small GTPase superfamily, Rho type | ||
| Orthology group | MCL11725 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215926-TA
ATGTTTAAATTGCTCATTATTGGAAACAGCTCAGTAGGAAAAACCAGTTTCCTTTTTCGCTACGCCGACGATTCGTTCACATCAGCGTTTGTGTCAACAGTAGGAATCGACTTTAAGGTCAAAACAGTCTTCCGTCATGACAAACGCGTTAAACTTCAGATATGGGATACCGCAGGTCAAGAACGTTACCGCACTATAACCACAGCCTACTACCGAGGGGCTATGGGATTTATATTAATGTATGACATTACAAACGAGGAAAGTTTCAATAGTGTCCAAGATTGGGTTACACAAATAAAGACGTATTCTTGGGACAACGCGCAAGTAATTCTTGTGGGGAATAAGTGTGATATGGAAGAGGAGCGCGTTGTTAGCTCGGAACGCGGCCGCCAGCTTGCAGACCAACTGGGTGTAGAGTTCTATGAGACATCTGCTAAAGAAAATATTAACGTTAAGGCGGTTTTCGAACGGCTGGTGGATATAATCTGCGACAAGATGTCCGAGAGTCTAGACTCAGAGCCAGCGATGCTTGCTGGCGGCGCGCGTGGCCAACGCCTCACCGAACAGCCGCAGGGCAATAGCAACCCTAACTGCAACTGTTAA
>DPOGS215926-PA
MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEEERVVSSERGRQLADQLGVEFYETSAKENINVKAVFERLVDIICDKMSESLDSEPAMLAGGARGQRLTEQPQGNSNPNCNC-