| DPOGS215944 | ||
|---|---|---|
| Transcript | DPOGS215944-TA | 204 bp |
| Protein | DPOGS215944-PA | 67 aa |
| Genomic position | DPSCF300308 + 40373-41163 | |
| RNAseq coverage | 23x (Rank: top 78%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA001953-TA | 5e-12 | 49.30% | |
| Drosophila | bl-PC | 2e-06 | 47.06% | |
| EBI UniRef50 | UniRef50_F4WCX0 | 9e-08 | 58.93% | Heterogeneous nuclear ribonucleoprotein K n=5 Tax=Endopterygota RepID=F4WCX0_ACREC |
| NCBI RefSeq | XP_968538.2 | 5e-11 | 61.82% | PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k [Tribolium castaneum] |
| NCBI nr blastp | gi|189238821 | 1e-09 | 61.82% | PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k [Tribolium castaneum] |
| NCBI nr blastx | gi|189238821 | 4e-10 | 61.82% | PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003723 | 5.5e-08 | RNA binding | |
| KEGG pathway | tca:656952 | 2e-10 | ||
| K12886 (HNRNPK) | maps-> | Spliceosome | ||
| InterPro domain | [23-49] IPR018111 | 5.5e-08 | K Homology, type 1, subgroup | |
| Orthology group | MCL22720 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215944-TA
ATGAAACGCGACGCGTACGGTGACGATGGTCCCATGCAGAAAAGACAGCGACACAGCGACGATGAGGTCACCTTCCTCATACCGAGCAAGGTCGCTGGGTCAATTATTGGGAAAGGAGGCGCTAACATATCCAAGCTGAGGAATGAGGTACCACCCGACCTTACTCATGTACCGCTCTTAATACAACGGAACCAATATCTTTGA
>DPOGS215944-PA
MKRDAYGDDGPMQKRQRHSDDEVTFLIPSKVAGSIIGKGGANISKLRNEVPPDLTHVPLLIQRNQYL-