| DPOGS215945 | ||
|---|---|---|
| Transcript | DPOGS215945-TA | 462 bp |
| Protein | DPOGS215945-PA | 153 aa |
| Genomic position | DPSCF300308 + 41431-43815 | |
| RNAseq coverage | 128x (Rank: top 57%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA001953-TA | 7e-10 | 68.18% | |
| Drosophila | bl-PC | 5e-18 | 48.86% | |
| EBI UniRef50 | UniRef50_F4WCX0 | 7e-24 | 61.63% | Heterogeneous nuclear ribonucleoprotein K n=5 Tax=Endopterygota RepID=F4WCX0_ACREC |
| NCBI RefSeq | XP_392536.3 | 8e-24 | 59.77% | PREDICTED: similar to bancal CG13425-PC, isoform C [Apis mellifera] |
| NCBI nr blastp | gi|332027896 | 3e-23 | 61.63% | Heterogeneous nuclear ribonucleoprotein K [Acromyrmex echinatior] |
| NCBI nr blastx | gi|332027896 | 1e-22 | 61.63% | Heterogeneous nuclear ribonucleoprotein K [Acromyrmex echinatior] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003723 | 4.6e-06 | RNA binding | |
| KEGG pathway | ame:409007 | 2e-23 | ||
| K12886 (HNRNPK) | maps-> | Spliceosome | ||
| InterPro domain | [86-111] IPR018111 | 4.6e-06 | K Homology, type 1, subgroup | |
| Orthology group | MCL35077 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215945-TA
ATGGAGACGTCCGGTGCGCCGCTACAACGCTCTCGGTTGCCGGTCCCGCCGCCGCCGCCTGCCGCCGCCCCGTCGCAGTACAAAGCCTCTATAACAGTCCCAGATTGCCCTGGCCCCGAACGAGTACTCTCCATAACGGCCTCGGATATCGACACTATTATGGAAATCGTAAAAGAGATACTGCCCAATCTGGCTGACGCCTCAGGGCCAGGTTCAGGGACGAAACACGGCGGCAGTAGTGACGACTTGGACGTCCGTCTGTTGATACATCAGAGCCGGGCCGGTTGTGTGATTGGGAAGGCTGGTGCGAAGATCAAGGAGCTCAGAGAGCGGATTCCGATCGTGTCAATGGACTCTACCTGTGAGGACAAAACGCCTGAAATATATGCGAGTAAACATAATGGTAGAATGGTTTTAACGTTCCGCGACGCCGTATCATCAATAGGATACCGTCAATTGTGA
>DPOGS215945-PA
METSGAPLQRSRLPVPPPPPAAAPSQYKASITVPDCPGPERVLSITASDIDTIMEIVKEILPNLADASGPGSGTKHGGSSDDLDVRLLIHQSRAGCVIGKAGAKIKELRERIPIVSMDSTCEDKTPEIYASKHNGRMVLTFRDAVSSIGYRQL-