| DPOGS215950 | ||
|---|---|---|
| Transcript | DPOGS215950-TA | 741 bp |
| Protein | DPOGS215950-PA | 246 aa |
| Genomic position | DPSCF301156 - 1924-4294 | |
| RNAseq coverage | 317x (Rank: top 36%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015596 | 1e-99 | 68.48% | |
| Bombyx | BGIBMGA004852-TA | 9e-128 | 80.73% | |
| Drosophila | sec23-PD | 2e-120 | 73.19% | |
| EBI UniRef50 | UniRef50_F5H365 | 2e-107 | 67.27% | Sec23 homolog A (S. cerevisiae) n=11 Tax=Euarchontoglires RepID=F5H365_HUMAN |
| NCBI RefSeq | XP_002431175.1 | 5e-121 | 73.55% | protein transport protein Sec23A, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|242021485 | 9e-120 | 73.55% | protein transport protein Sec23A, putative [Pediculus humanus corporis] |
| NCBI nr blastx | gi|195108665 | 1e-113 | 73.09% | GI23366 [Drosophila mojavensis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006886 | 2.2e-25 | intracellular protein transport | |
| GO:0030127 | 2.2e-25 | COPII vesicle coat | ||
| GO:0006888 | 2.2e-25 | ER to Golgi vesicle-mediated transport | ||
| KEGG pathway | phu:Phum_PHUM514700 | 1e-120 | ||
| K14006 (SEC23) | maps-> | Protein processing in endoplasmic reticulum | ||
| InterPro domain | [79-147] IPR006900 | 2.2e-25 | Sec23/Sec24, helical domain | |
| [2-64] IPR012990 | 3.2e-18 | Sec23/Sec24 beta-sandwich | ||
| [159-241] IPR007123 | 2.3e-10 | Gelsolin domain | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215950-TA
ATGGGGAACACATGCCAATGGAAAATGTGCACCTTCACACCCAGCACTACAATGGCTATCTTCTTTGAGGTGGTAAACCAGCACACAGCGCCCTTACCAGCAGGTGGTCGCGGCTGTGTCCAGCTCATCACGCAGTACCAGCACTCCAGCGGGCAGAGACGCGTCAGGGTCACTACCATTGCTAGAAACTGGGGCGATGCTGCCGTCAACCTTCATCATATATCAGCCGGCTTCGACCAGGAAGCCGCCGCGGTAGTGATGGCCCGCCTCGTGGTGTACCGCGCCGAACAAGAGGACGGACCGGATGTACTGCGCTGGTTGGACCGGATGCTGATACGACTGTGTCAGAAGTTCGGGGAGTATGCTAAGGATGATCCTAACAGTTTCCGTCTACACATGTTAATGCGTGAGGACCTCACCCAGTCCCTCATCATGATCCAGCCCATACTGTACTCCTACAGTTTCGGAGGTCCCCCAGAGCCTGTTCTGCTGGACACTTCCTCCATACAGCCTGACAGGATACTGCTTATGGATACTTTCTTCCAGATCTTGATATACCATGGAGAGACTATAGCCCAATGGAGGGCGCTGCGCTACCAGGACATGGCAGAGTACGAGAGCTTTGCCCAGCTGTTGAGGGCTCCTGTAGACGACGCACAGGATATCCTGCAGAACAGATTCCCCGTCCCTCGGTATATTGACACAGAGCACGGAGGTTCACAGGTCAGTCGAAGAACTTAG
>DPOGS215950-PA
MGNTCQWKMCTFTPSTTMAIFFEVVNQHTAPLPAGGRGCVQLITQYQHSSGQRRVRVTTIARNWGDAAVNLHHISAGFDQEAAAVVMARLVVYRAEQEDGPDVLRWLDRMLIRLCQKFGEYAKDDPNSFRLHMLMREDLTQSLIMIQPILYSYSFGGPPEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYESFAQLLRAPVDDAQDILQNRFPVPRYIDTEHGGSQVSRRT-