DPOGS215988 | ||
---|---|---|
Transcript | DPOGS215988-TA | 726 bp |
Protein | DPOGS215988-PA | 241 aa |
Genomic position | DPSCF300078 - 109155-119974 | |
RNAseq coverage | 673x (Rank: top 19%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL016680 | 4e-113 | 93.00% |   |
Bombyx | BGIBMGA001180-TA | 3e-53 | 91.54% |   |
Drosophila | cad-PA | 1e-30 | 75.28% |   |
EBI UniRef50 | UniRef50_Q17243 | 8e-98 | 86.18% | Cad protein n=3 Tax=Obtectomera RepID=Q17243_BOMMO |
NCBI RefSeq | NP_001037514.1 | 2e-98 | 86.18% | caudal-like [Bombyx mori] |
NCBI nr blastp | gi|112984380 | 3e-97 | 86.18% | caudal-like [Bombyx mori] |
NCBI nr blastx | gi|112984380 | 5e-126 | 87.76% | caudal-like [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005515 | 3e-17 | protein binding | |
GO:0003677 | 1.7e-16 | DNA binding | ||
GO:0006355 | 1.7e-16 | regulation of transcription, DNA-dependent | ||
GO:0043565 | 3.7e-13 | sequence-specific DNA binding | ||
GO:0003700 | 3.7e-13 | sequence-specific DNA binding transcription factor activity | ||
KEGG pathway |   | |||
InterPro domain | [109-186] IPR009057 | 3e-17 | Homeodomain-like | |
[104-176] IPR012287 | 1.7e-16 | Homeodomain-related | ||
[120-174] IPR001356 | 3.7e-13 | Homeobox | ||
Orthology group | MCL18984 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS215988-TA
ATGGTGAATTACGTCAATCCGCTCGCCATGTACCAGGGCAAGGGCGGACAGTACGGCGCGGGGGGTTGGTACGGATGGCAGCATCAGAACTTTGAGGAACAGCAGTGGTGTGCGTGGAATGGAGCGCCGACGGCTGGCGAATGGCCATCGGATCCTCATCACTTTAAGCGCGAGCCGGGCGAGAGAGATGTCGGGGAAATGCCGTCTCCAGCGCGAGGTGACCTGGCTAGCCCAGGAGAAGGGTCTCCAGGCTCCAGGTCAGCGCAGCCGCCGGTGCCGCCGCGATCGCCATATGAATGGATGAAGAAACCCAGCTACCAGTCACAGCCAAATCCAGGGAAAACACGCACGAAAGATAAATATCGGGTAGTGTATACTGACCACCAACGATTGGAGCTGGAGAAAGAATTCCATTATAGTCGATACATCACCATCAGACGGAAAGCCGAGCTCGCTGTTAGCTTCCCTGAGAGGCTTTCTGTAAAAATATGGTTTCAAAATCGACGCGCCAAAGAAAGGAAACAGGTAAAGAAACGCGAAGAAGTGGTGATGAAAGAAAAGGGTGATCATGCATCCCTTCAGCACGCGCAGCTTCATCACGCGACAATGCTGCACCACCAACACATGATGAACGGTATGATGCATCATCATCACTACCATCAAGGCGTTTTGCAAGGCGTGCCAGAGCCATTAGCCCCAGGGGTGGCACCAGTTCCTCTCCTGTGA
>DPOGS215988-PA
MVNYVNPLAMYQGKGGQYGAGGWYGWQHQNFEEQQWCAWNGAPTAGEWPSDPHHFKREPGERDVGEMPSPARGDLASPGEGSPGSRSAQPPVPPRSPYEWMKKPSYQSQPNPGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAVSFPERLSVKIWFQNRRAKERKQVKKREEVVMKEKGDHASLQHAQLHHATMLHHQHMMNGMMHHHHYHQGVLQGVPEPLAPGVAPVPLL-