| DPOGS215988 | ||
|---|---|---|
| Transcript | DPOGS215988-TA | 726 bp |
| Protein | DPOGS215988-PA | 241 aa |
| Genomic position | DPSCF300078 - 109155-119974 | |
| RNAseq coverage | 673x (Rank: top 19%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016680 | 4e-113 | 93.00% | |
| Bombyx | BGIBMGA001180-TA | 3e-53 | 91.54% | |
| Drosophila | cad-PA | 1e-30 | 75.28% | |
| EBI UniRef50 | UniRef50_Q17243 | 8e-98 | 86.18% | Cad protein n=3 Tax=Obtectomera RepID=Q17243_BOMMO |
| NCBI RefSeq | NP_001037514.1 | 2e-98 | 86.18% | caudal-like [Bombyx mori] |
| NCBI nr blastp | gi|112984380 | 3e-97 | 86.18% | caudal-like [Bombyx mori] |
| NCBI nr blastx | gi|112984380 | 5e-126 | 87.76% | caudal-like [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 3e-17 | protein binding | |
| GO:0003677 | 1.7e-16 | DNA binding | ||
| GO:0006355 | 1.7e-16 | regulation of transcription, DNA-dependent | ||
| GO:0043565 | 3.7e-13 | sequence-specific DNA binding | ||
| GO:0003700 | 3.7e-13 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | ||||
| InterPro domain | [109-186] IPR009057 | 3e-17 | Homeodomain-like | |
| [104-176] IPR012287 | 1.7e-16 | Homeodomain-related | ||
| [120-174] IPR001356 | 3.7e-13 | Homeobox | ||
| Orthology group | MCL18984 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215988-TA
ATGGTGAATTACGTCAATCCGCTCGCCATGTACCAGGGCAAGGGCGGACAGTACGGCGCGGGGGGTTGGTACGGATGGCAGCATCAGAACTTTGAGGAACAGCAGTGGTGTGCGTGGAATGGAGCGCCGACGGCTGGCGAATGGCCATCGGATCCTCATCACTTTAAGCGCGAGCCGGGCGAGAGAGATGTCGGGGAAATGCCGTCTCCAGCGCGAGGTGACCTGGCTAGCCCAGGAGAAGGGTCTCCAGGCTCCAGGTCAGCGCAGCCGCCGGTGCCGCCGCGATCGCCATATGAATGGATGAAGAAACCCAGCTACCAGTCACAGCCAAATCCAGGGAAAACACGCACGAAAGATAAATATCGGGTAGTGTATACTGACCACCAACGATTGGAGCTGGAGAAAGAATTCCATTATAGTCGATACATCACCATCAGACGGAAAGCCGAGCTCGCTGTTAGCTTCCCTGAGAGGCTTTCTGTAAAAATATGGTTTCAAAATCGACGCGCCAAAGAAAGGAAACAGGTAAAGAAACGCGAAGAAGTGGTGATGAAAGAAAAGGGTGATCATGCATCCCTTCAGCACGCGCAGCTTCATCACGCGACAATGCTGCACCACCAACACATGATGAACGGTATGATGCATCATCATCACTACCATCAAGGCGTTTTGCAAGGCGTGCCAGAGCCATTAGCCCCAGGGGTGGCACCAGTTCCTCTCCTGTGA
>DPOGS215988-PA
MVNYVNPLAMYQGKGGQYGAGGWYGWQHQNFEEQQWCAWNGAPTAGEWPSDPHHFKREPGERDVGEMPSPARGDLASPGEGSPGSRSAQPPVPPRSPYEWMKKPSYQSQPNPGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAVSFPERLSVKIWFQNRRAKERKQVKKREEVVMKEKGDHASLQHAQLHHATMLHHQHMMNGMMHHHHYHQGVLQGVPEPLAPGVAPVPLL-