Monarch geneset OGS2.0

DPOGS216037
TranscriptDPOGS216037-TA3666 bp
ProteinDPOGS216037-PA1221 aa
Genomic positionDPSCF300067 - 397498-416922
RNAseq coverage681x (Rank: top 19%)
Annotation
HeliconiusHMEL0089350.082.88% 
BombyxBGIBMGA009017-TA0.078.45% 
DrosophilaRhoGAP68F-PA1e-1531.14% 
EBI UniRef50UniRef50_E0VGN33e-11141.61%Rho GTPase regulating protein, putative n=1 Tax=Pediculus humanus corporis RepID=E0VGN3_PEDHC
NCBI RefSeqXP_002425277.15e-11241.61%Rho GTPase regulating protein, putative [Pediculus humanus corporis]
NCBI nr blastpgi|2420089929e-11141.61%Rho GTPase regulating protein, putative [Pediculus humanus corporis]
NCBI nr blastxgi|2420089929e-10836.63%Rho GTPase regulating protein, putative [Pediculus humanus corporis]
Group
Gene OntologyGO:00071655e-38signal transduction
GO:00056225e-38intracellular
GO:00055151.5e-08protein binding
KEGG pathway 
InterPro domain[409-601] IPR0089365e-38Rho GTPase activation protein
[410-602] IPR0001982.9e-34Rho GTPase-activating protein domain
[160-258] IPR0119931.5e-08Pleckstrin homology-type
Orthology groupMCL16988 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS216037-TA
ATGATAGCCGGGAGTCGGAGCGCCGTGGATAATAACAAAAATGTTTTTAGTGCGTTAGTTAGACCCATTGTTGTACGGTGCGCATACGCATCGCGTGGGGCGTTCGTGTCAGTCTTAATCGAACCGTACGCACAGACGGTTGTCAAAGCTCTTTTAATAACCGGTGTATTTGGCATTGTCGCCGACACGCTCGAGGAGCTCTGTGGACTCGGGAAGTTCCCTCAGGACTCCATCGAACGTCTCGCGCAATACGAGCGGCTGGTGGGTGGGGGCTGTGGTCGGCGGCGCGCCGCTAGACTGTCGGACCTCGAGCGCGTGCAGGACCTCTTCCCGCACGACTATCTCGCACTGCACGATGCGGACGCACCATCAGCACTCGCATCTCATGGACAGAAGTCCAAAAGTCTTCGCAAACGTCCAAGTTTGGACATCGGCGGCACAGTTAGTGGCAACAACAGTACGCTGTCGCCCCGCACCTTCATAATGGAAGCACCTGTCCAATTATGTCCTCTTGGATCCACCTCCCCACCGCTAGAACGCCATTTGTTTCTCTTTAGTGACCTACTGCTTGTAGGAAAGTCTAGAGGAACTAACTGCTTTAAGTTAAAAGAGAGTGTAAGGCTGGCAGAACTGTGGCTCTCCCTACCTGAAAGTGATGATACAGGTTTCCTCATCGGATGGCCAACAGTTAGCGGAGTCACAAATTACCTCGCTACGTATCCCACACAAGCTGCTAGAGATACTTGGTACAGGAAAATCCAAAATGCTTTAACTGTCCAACTAGCCTCAGAACCAAAGTCAACAAACATTCAAATCTTCTATAAAGATGTAACGAGCTCCATAGAATTCTGTAAGACGGTATGTATAAATCCAGAAATGAGCGCCCGTTGCGTGGTTCGCCAAGCGCTTCAAGTTTTGCAAAATAATGGTGAGGTTGAGGGGGAAAACGATGGAGGTGGTGAGGAGGGCAGGTTAGGGGCACCAGCCGACTTCACGCTCTGCATCCGCGCCACCCGGGACACCCCGCTATCCCCCCTGCAAGGCATCGAACGACCGCATGCTGTTCAGATGTCAAAAATAAGGCAAACTTTATCTAATGAAGATGGTTTCGATTTGGAGCATGTTAACGCTAAAAATAATCCATGCGGATTAGTTTTTGAGTTACGAAAGAAGAATCAAGGTCTAAAAAGTAACGTACCCCCCGGTCGCGGCCTCCGTCTACTCAGACGCGGCGGTCGGTTGTTCGGTGTAGCGCTCACTCGTCTCTGTAACGGAACGCCGCCGCCCGCGCTGCTGCACGCGTTGAAAAGACTGCGGGTCACGGCACCACTCACGCATGGCGTCTTTAGAAGGAGCGCGAACGCTAAAGCCCTCAGACTGTTGAGGGATAAGTTGGACGCTCTTGGTCCTTGGGCGGAGGGTGGTGTGGAATTGGAGCGAGCTCCGGTCCTGCTTGTAGCGGCGCTGGTCAAAGAATTCTTTCGCGCACTGCCTCAGCCTCTCCTCGCTTCTGAACTGTACCCTGCCTGGCTGCAGGTTCTCGGTTTGCCTCAAACGGAAAAAGTAAACGCCGTGCGCTCCTTACTCTTGAAGCTTCCAAAATCACATTACAACATGTTAATGTACTTCGTTTGCCTTTTACAAGCAATTGCTAAGAAATCTAATATTAATCTAATGTGTCCTATGAACTTGGGTGTTTGTGTTGGTCCTAGTTTATTGTGGCCGAATGTTCCCTGTGACAAAGCTCCCAAAGCAGTGCCATTGATAGTTGAACTACTTATAGTAAAAGCTGAGGCTCTTTTCGGCCCTCAAGTAACTGGTCTTCTCGGAAACGGAAGCCCTGAATCATCTAACGCCCTTCTAGACTCTGGTGCTGAAGAGAGTGATAGCCTTCATTCAGTTGGGATCTCCTTAGATTCCATGGAATTGTCGACACCCAGAAAAGAAAAATTATCATTAAGTAGAGACTCTGGTTTGACACTTTCAGAAGATGATTCAAATAGTAACGGGGGAAACAGTCCCGCACCTCGTAATATTTTACATAGTCTGTCTGCACCAACTTGCAACATTCAACAAGATCCTAAGTTAAACTCGCGCTATACAAATGAAAACCCCAATGTCAATGGTCTACCAAAAATTCCCCAGAGGCAAAATAATATCTATTCCAATAAAGCGGAAATGTACAGTACTGTTAATGAAGAACTTTACACAATACCATACATGGGAGAAAAATACGTTCATAATACGATTAATATCGGTATCTCAAATGGGATTGATGACAGAAATTATATATCGAAGACAGCAGTACAACGCTCAACCGCTGATATTTACGGTCAAAGTCCTGCGAAGTATATTACTGGCTTAGAGCCTCAAAAACCGCCAAGAAGCAATGTTTCAAAAGCAGCAAGAACATCAAAAGTATACAGTATGTATGCTGAAACTCAAGAAACTGATAAAAATGTTACTAACAAAAATTTCAATAGAGCTAAAAGCTCTGACAACTTATTAGAAGTAAAGCAAGAAGCTATGGATAAACAACGCGACATGGTTTCCAGTCAAGAAAATATTGTTTATAGCAACATTCACGACCTTGCCATGTTTACGGAAAACATTCAACGGCAAAACCAATATCAAACACATGCGGAAATTAGAAATAATTCAAATTATTCTCGTGTTTACACTGGTTGGGAAAACAAAAGCCCTAACTATTGTGCAAACGGCCAAGTAAACTGTCAAAATGAGAACATTTACGGACAGATGACTAAGAATTCAGGAGATTCCTCGCAAAACAAAACACCAGATGGGAAAACTACTCCGGCAGCCACCATTTTTACAAGAAATGACTGGTCTCGTCAAGCAGCGAGGACAAAAAGCTTAGAAGTGGGTGAAGAAGGACACAGTAATGTTACAGAGAAATCTCGTAATACTAATTACGAAATAAACATTGTAAACTGTTGTCGAAAAAGACGGTTCGATCCTGCTCACCTGTGCACGAAGAATTGCATAACGCTCTCGATGGTGCACAATCGAGACAAAGACAAACACGCGACTAATCAACAAAATTCTTATAACTACGTCGATGATATATCCAACAATTCTGATGAGAAGTGCAGAATTCGAAACTACAATAACAATAAACTGAATCAATCGAAGTCATTGGCAAATATAATATTACAGAGCGATTCAAGCAGTAACGATACTTTATACCAACCGCAAAACTCATTTCATAGCCGGTCGACTGAATCAACGGCTAGCGAAAATTCCTTCGAAAATTGCTACACGAGCCAATACATAGAGCCTCTGTACACGTCGGTCTATAATAGAAGAAGGGATATATTTCACGAAGAAAAGAGCAACATATTCTCTTCGGATATATACAAAGCGACACCCACATCAGTGAAACCGGATTATGCGTCTGAAAAGGAACAAAACAATAACAAGAAGCCATTAAACATGCCACCACCAGTTCCACCTAGAAAAATGGTATATCAAAGGGTTTTAAAAAAGTTCCAACCAGTTCACGTGAACAAAGACGACAAGGCTACGCGTTCGAAATCTGTGCCGCCTTTATACAGAGACCCACCTAATGGAACTGAGAAAAACGGACAAAATGGTGTGGCTCTCTACTGTTCGGAATCCGACACGGAATCGGAATCGTACGTGTAA

Protein sequence:

>DPOGS216037-PA
MIAGSRSAVDNNKNVFSALVRPIVVRCAYASRGAFVSVLIEPYAQTVVKALLITGVFGIVADTLEELCGLGKFPQDSIERLAQYERLVGGGCGRRRAARLSDLERVQDLFPHDYLALHDADAPSALASHGQKSKSLRKRPSLDIGGTVSGNNSTLSPRTFIMEAPVQLCPLGSTSPPLERHLFLFSDLLLVGKSRGTNCFKLKESVRLAELWLSLPESDDTGFLIGWPTVSGVTNYLATYPTQAARDTWYRKIQNALTVQLASEPKSTNIQIFYKDVTSSIEFCKTVCINPEMSARCVVRQALQVLQNNGEVEGENDGGGEEGRLGAPADFTLCIRATRDTPLSPLQGIERPHAVQMSKIRQTLSNEDGFDLEHVNAKNNPCGLVFELRKKNQGLKSNVPPGRGLRLLRRGGRLFGVALTRLCNGTPPPALLHALKRLRVTAPLTHGVFRRSANAKALRLLRDKLDALGPWAEGGVELERAPVLLVAALVKEFFRALPQPLLASELYPAWLQVLGLPQTEKVNAVRSLLLKLPKSHYNMLMYFVCLLQAIAKKSNINLMCPMNLGVCVGPSLLWPNVPCDKAPKAVPLIVELLIVKAEALFGPQVTGLLGNGSPESSNALLDSGAEESDSLHSVGISLDSMELSTPRKEKLSLSRDSGLTLSEDDSNSNGGNSPAPRNILHSLSAPTCNIQQDPKLNSRYTNENPNVNGLPKIPQRQNNIYSNKAEMYSTVNEELYTIPYMGEKYVHNTINIGISNGIDDRNYISKTAVQRSTADIYGQSPAKYITGLEPQKPPRSNVSKAARTSKVYSMYAETQETDKNVTNKNFNRAKSSDNLLEVKQEAMDKQRDMVSSQENIVYSNIHDLAMFTENIQRQNQYQTHAEIRNNSNYSRVYTGWENKSPNYCANGQVNCQNENIYGQMTKNSGDSSQNKTPDGKTTPAATIFTRNDWSRQAARTKSLEVGEEGHSNVTEKSRNTNYEINIVNCCRKRRFDPAHLCTKNCITLSMVHNRDKDKHATNQQNSYNYVDDISNNSDEKCRIRNYNNNKLNQSKSLANIILQSDSSSNDTLYQPQNSFHSRSTESTASENSFENCYTSQYIEPLYTSVYNRRRDIFHEEKSNIFSSDIYKATPTSVKPDYASEKEQNNNKKPLNMPPPVPPRKMVYQRVLKKFQPVHVNKDDKATRSKSVPPLYRDPPNGTEKNGQNGVALYCSESDTESESYV-