| DPOGS216064 | ||
|---|---|---|
| Transcript | DPOGS216064-TA | 615 bp |
| Protein | DPOGS216064-PA | 204 aa |
| Genomic position | DPSCF300067 + 281315-284078 | |
| RNAseq coverage | 23220x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008921 | 8e-101 | 88.24% | |
| Bombyx | BGIBMGA008865-TA | 8e-108 | 89.22% | |
| Drosophila | RpL13A-PB | 4e-79 | 65.20% | |
| EBI UniRef50 | UniRef50_B8XVP4 | 8e-72 | 64.53% | 60S ribosomal protein L13a n=11 Tax=Eukaryota RepID=B8XVP4_OCHTA |
| NCBI RefSeq | NP_001037156.1 | 3e-106 | 89.22% | ribosomal protein L13A [Bombyx mori] |
| NCBI nr blastp | gi|342356425 | 9e-113 | 97.06% | ribosomal protein L13A [Heliconius melpomene cythera] |
| NCBI nr blastx | gi|342356425 | 3e-113 | 97.06% | ribosomal protein L13A [Heliconius melpomene cythera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 3.2e-102 | ribosome | |
| GO:0015934 | 3.2e-102 | large ribosomal subunit | ||
| GO:0006412 | 3.2e-102 | translation | ||
| GO:0003735 | 3.2e-102 | structural constituent of ribosome | ||
| KEGG pathway | nvi:100118263 | 3e-96 | ||
| K02872 (RP-L13Ae, RPL13A) | maps-> | Ribosome | ||
| InterPro domain | [4-205] IPR005822 | 3.2e-102 | Ribosomal protein L13 | |
| [4-205] IPR005755 | 3.2e-102 | Ribosomal protein L13, eukaryotic/archaeal | ||
| [9-151] IPR023564 | 1e-55 | Ribosomal protein L13 domain | ||
| Orthology group | MCL13063 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS216064-TA
ATGACGGGTTTTAGTAATAAGGCCATTGTCATCGATGGCCGCGGCCATCTGCTCGGCCGCCTGGCCGCAGTCATCGCTAAGGTCCTCTTGGAAGGAAATAAAGTGGTTGTCGTGAGGTGTGAACAACTCAACATCTCAGGAAACTTCTTCAGGAACAAGCTGAAGTTTATGTCATTTTTACGCAAACGCTGCAATGTCAATCCAGCCCGTGGGCCATTCCACTTCAGAGCACCTTCTAAGGTTCTGTGGAAAACAGTGCGAGGTATGATCCCTCACAAGACTGAGCGCGGTAAGGACGCGTTGAGACGGTTACGTGCGTACGATGGTTGCCCACCACCATACGACAACCGTCGTCGTGTTGTCGTGCCAGCGGCGTTACGTGTGTTCTGTCTGAGACCTGGACGCAAGTACTGTCATGTTGGTCGTTTGTCTCACGAAGTTGGATGGAAGTACCGTGATGTTGTCCGTAAGCTGGAAGACAAGAGAAAGTTCAAGACCATACATAAAGTAGCTTATGAGAATAAACTCAAGAAAATCACCAAGGAGGCTGGTGAGAAGGTTGCAAAAACAACCGCACCATTCACCGCCATCATGCAATCCTATGGATACAATTAG
>DPOGS216064-PA
MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKVLWKTVRGMIPHKTERGKDALRRLRAYDGCPPPYDNRRRVVVPAALRVFCLRPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKFKTIHKVAYENKLKKITKEAGEKVAKTTAPFTAIMQSYGYN-