| DPOGS216087 | ||
|---|---|---|
| Transcript | DPOGS216087-TA | 342 bp |
| Protein | DPOGS216087-PA | 113 aa |
| Genomic position | DPSCF300415 + 16319-17375 | |
| RNAseq coverage | 50855x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006232 | 3e-61 | 100.00% | |
| Bombyx | BGIBMGA007795-TA | 2e-61 | 99.12% | |
| Drosophila | RpL30-PB | 2e-50 | 82.88% | |
| EBI UniRef50 | UniRef50_P67883 | 3e-50 | 84.07% | 60S ribosomal protein L30 n=63 Tax=Eukaryota RepID=RL30_CHICK |
| NCBI RefSeq | NP_001037239.1 | 8e-60 | 99.12% | ribosomal protein L30 [Bombyx mori] |
| NCBI nr blastp | gi|268306416 | 9e-59 | 100.00% | ribosomal protein L30 [Manduca sexta] |
| NCBI nr blastx | gi|268306416 | 1e-57 | 100.00% | ribosomal protein L30 [Manduca sexta] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1.8e-92 | ribosome | |
| GO:0006412 | 1.8e-92 | translation | ||
| GO:0005622 | 1.8e-92 | intracellular | ||
| GO:0003735 | 1.8e-92 | structural constituent of ribosome | ||
| KEGG pathway | aag:AaeL_AAEL005085 | 2e-52 | ||
| K02908 (RP-L30e, RPL30) | maps-> | Ribosome | ||
| InterPro domain | [1-112] IPR000231 | 1.8e-92 | Ribosomal protein L30e | |
| [13-105] IPR004038 | 2.3e-26 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 | ||
| Orthology group | MCL10860 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS216087-TA
ATGGTTGCGGCCAAGAAACAAAAAAAGACCATCGAGTCGATCAACTCAAGATTGGCTTTGGTTATGAAATCTGGCAAATACTGCCTTGGCTACAAGCAGACATTGAAGACACTGCGTCAAGGAAAAGCTAAGCTGGTGATAATCGCTAAGAATGCTCCTCCACTAAGAAAATCTGAGATTGAATACTATGCCTTATTGGCGAAGACTGGAGTCCACCACTACAGTGGTAACAACATAGAATTGGGCACAGCTTGTGGGAAATACTACCGAGTGTGTACACTTGCTATCACAGACCCCGGTGACTCAGATATCATCACCACCCTGCCTGAGGCAACAGCATAG
>DPOGS216087-PA
MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEATA-