DPOGS216098 | ||
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Transcript | DPOGS216098-TA | 708 bp |
Protein | DPOGS216098-PA | 235 aa |
Genomic position | DPSCF300182 - 416708-439747 | |
RNAseq coverage | 20x (Rank: top 80%) |
Annotation | ||||
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Heliconius | HMEL009702 | 5e-62 | 97.41% |   |
Bombyx | BGIBMGA009432-TA | 3e-70 | 75.14% |   |
Drosophila | toy-PA | 1e-73 | 81.66% |   |
EBI UniRef50 | UniRef50_F4WTH3 | 3e-73 | 67.12% | Paired box protein Pax-6 n=6 Tax=Coelomata RepID=F4WTH3_ACREC |
NCBI RefSeq | XP_001944246.1 | 4e-75 | 82.66% | PREDICTED: similar to toy [Acyrthosiphon pisum] |
NCBI nr blastp | gi|270006382 | 7e-77 | 78.33% | twin of eyeless [Tribolium castaneum] |
NCBI nr blastx | gi|270006382 | 2e-75 | 71.63% | twin of eyeless [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0003677 | 6e-90 | DNA binding | |
GO:0006355 | 6e-90 | regulation of transcription, DNA-dependent | ||
GO:0005515 | 1.3e-40 | protein binding | ||
KEGG pathway | xtr:448447 | 5e-70 |   | |
  | K08031 (PAX6) | maps-> | Maturity onset diabetes of the young | |
InterPro domain | [18-142] IPR001523 | 6e-90 | Paired box protein, N-terminal | |
[19-144] IPR009057 | 1.3e-40 | Homeodomain-like | ||
[21-86] IPR011991 | 1.1e-36 | Winged helix-turn-helix transcription repressor DNA-binding | ||
Orthology group | MCL18880 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS216098-TA
ATGCATAGCGCGGCGATGGGTGGTGGAGCGCTGTTCGGATGCTCGTCTGCAGGGCACAGCGGCATCAACCAGCTCGGAGGGGTCTATGTGAACGGCAGACCGCTCCCGGACTCCACGAGGCAGAAGATAGTGGAACTGGCGCACTCCGGAGCACGACCCTGCGACATCAGCAGGATACTCCAAGTCAGCAACGGATGCGTCTCCAAGATACTGGGAAGGTATTACGAGACCGGTTCTATAAGACCGCGCGCCATCGGCGGTTCCAAGCCCCGTGTGGCTACAGCCGAAGTTGTTAGCAAGATAGCCCAGTACAAGAGAGAATGTCCATCCATCTTCGCCTGGGAGATAAGGGACCGTCTGCTCAGCGAGGGTGTCTGCACGTCAGATAATATTCCAAGCGTTTCTTCAATAAACCGTGTGTTACGAAACCTGGCTGCTCAGAAAGAAAAGTCAAGCAACCAGCAACCATCCAACGACTGTTCGACGCCTGTATACGAGCGGTTGCGATTACTTGGTACCCCGGGATCGGCTCCGACGTGGCCGAGGTCGCCCTGGCCGACGCAGATAGACACCAGAACACCACCTTACCAACTACACAGCTTGAGTCCTGGACCTCAGGCTATTGGCTGCAACGGCACAGAACTGCCGGTCATGAAGAAAGGGTTGAAAGTCCAGTGGGCGGAGCGCGCATTACTGCCGCCCTGGTGA
>DPOGS216098-PA
MHSAAMGGGALFGCSSAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATAEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTSDNIPSVSSINRVLRNLAAQKEKSSNQQPSNDCSTPVYERLRLLGTPGSAPTWPRSPWPTQIDTRTPPYQLHSLSPGPQAIGCNGTELPVMKKGLKVQWAERALLPPW-