DPOGS216099 | ||
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Transcript | DPOGS216099-TA | 819 bp |
Protein | DPOGS216099-PA | 272 aa |
Genomic position | DPSCF300182 - 408970-411181 | |
RNAseq coverage | 8x (Rank: top 86%) |
Annotation | ||||
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Heliconius | HMEL004093 | 5e-43 | 95.45% |   |
Bombyx | BGIBMGA009546-TA | 3e-82 | 63.36% |   |
Drosophila | ey-PD | 4e-43 | 76.85% |   |
EBI UniRef50 | UniRef50_B4MF41 | 6e-42 | 77.06% | Eyeless n=5 Tax=Arthropoda RepID=B4MF41_DROVI |
NCBI RefSeq | NP_001103907.1 | 2e-46 | 63.19% | eyeless [Tribolium castaneum] |
NCBI nr blastp | gi|270006446 | 3e-45 | 63.19% | eyeless [Tribolium castaneum] |
NCBI nr blastx | gi|270006446 | 2e-44 | 63.19% | eyeless [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0003677 | 2.1e-26 | DNA binding | |
GO:0006355 | 2.1e-26 | regulation of transcription, DNA-dependent | ||
GO:0043565 | 1.7e-25 | sequence-specific DNA binding | ||
GO:0003700 | 1.7e-25 | sequence-specific DNA binding transcription factor activity | ||
GO:0005515 | 3.6e-22 | protein binding | ||
KEGG pathway | mmu:18508 | 3e-37 |   | |
  | K08031 (PAX6) | maps-> | Maturity onset diabetes of the young | |
InterPro domain | [28-110] IPR012287 | 2.1e-26 | Homeodomain-related | |
[50-112] IPR001356 | 1.7e-25 | Homeobox | ||
[24-110] IPR009057 | 3.6e-22 | Homeodomain-like | ||
Orthology group | MCL30665 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS216099-TA
ATGTTCGAGTCGTTAACGATCACAGGCGAGGAACCGCTTGAAGGTTTGGAAGCTCTACATTCTGATGAGACGGGTTCCGGAGACAACTCGAACGCGGGCTCCAGCGGCGCTGATGAAGACGCCGCGAGACTCCGACTGAAGAGGAAGTTACAGCGGAACAGAACCAGCTTCACCAACGAACAGATTGACAATCTGGAGAGAGAATTCGAGAGAACTCACTACCCCGACGTGTTCGCGCGGGAGAGACTCGCCGCTAAAATAGGACTCCCCGAAGCAAGGATACAGGTGTGGTTCTCGAATCGGCGCGCGAAGTGGCGTCGCGAGGAGAAGATCCGCAGCCAGAGACGGAGCCCCGAGTGCTTCACGACGCACGCCCACGCGCACGCACACGCGCACTCTCACGCGCACGCGCACGCGCCCGCACCGGTGACGCACGCGCACCCGCCCGCCCTCTCCGCGCCCGCACAACACTCGCAGCATCAATACCAGCCACCTCTCAACGTGGACACTTACAGACTTTGTACCATCGAGGAAGCGACGTATCGATACTATCAGCAGCTATTTTCCGATCTCGTGACCTGTTCCGTGTGTCGCAGCCCCTTGACTCCTATGGGCTACAGCGGCGGGATGGTGGGCGATTCTCCGGTGTGTGAGGGCGGGGACGAGCTGTGTAAGGGAGGTTTCCTGGGCTACCCGCGGTACGACCTGCCCTCGTACAGACACTACAACCACGGATACCAACACGAACCAGCCTCGCCACCGCCGGGTATGTCACAGCACTTAACAAATGACTATCACGGCTCTAGAAACATGTATTAA
>DPOGS216099-PA
MFESLTITGEEPLEGLEALHSDETGSGDNSNAGSSGADEDAARLRLKRKLQRNRTSFTNEQIDNLEREFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKIRSQRRSPECFTTHAHAHAHAHSHAHAHAPAPVTHAHPPALSAPAQHSQHQYQPPLNVDTYRLCTIEEATYRYYQQLFSDLVTCSVCRSPLTPMGYSGGMVGDSPVCEGGDELCKGGFLGYPRYDLPSYRHYNHGYQHEPASPPPGMSQHLTNDYHGSRNMY-