Monarch geneset OGS2.0

DPOGS216152
TranscriptDPOGS216152-TA312 bp
ProteinDPOGS216152-PA103 aa
Genomic positionDPSCF301801 + 459-913
RNAseq coverage17x (Rank: top 81%)
Annotation
HeliconiusHMEL0061671e-4590.22% 
Bombyx% 
DrosophilaMlh1-PA5e-3057.61% 
EBI UniRef50UniRef50_P406928e-3065.17%DNA mismatch repair protein Mlh1 n=71 Tax=Euteleostomi RepID=MLH1_HUMAN
NCBI RefSeqXP_001176052.12e-3267.78%PREDICTED: similar to DNA mismatch repair protein homolog [Strongylocentrotus purpuratus]
NCBI nr blastpgi|1156152254e-3167.78%PREDICTED: similar to DNA mismatch repair protein homolog [Strongylocentrotus purpuratus]
NCBI nr blastxgi|1156152258e-3069.32%PREDICTED: similar to DNA mismatch repair protein homolog [Strongylocentrotus purpuratus]
Group
Gene OntologyGO:00056348.1e-44nucleus
GO:00055248.1e-44ATP binding
GO:00062988.1e-44mismatch repair
GO:00309838.1e-44mismatched DNA binding
KEGG pathwayspu:5885456e-32 
 K08734 (MLH1)maps-> Colorectal cancer
    Pathways in cancer
    Endometrial cancer
    Mismatch repair
InterPro domain[1-99] IPR0111868.1e-44DNA mismatch repair protein Mlh1
[1-99] IPR0020998.1e-44DNA mismatch repair protein
[2-77] IPR0135079.5e-27DNA mismatch repair protein, C-terminal
[2-77] IPR0147211.4e-26Ribosomal protein S5 domain 2-type fold, subgroup
[1-78] IPR0205682.3e-23Ribosomal protein S5 domain 2-type fold
Orthology group 
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS216152-TA
ATGCTTCTATATATAAACCATAGATTAGTAGACTCACTGTCCATTCGTAAAGCCGTGGATTCCGTATATGCTACGTACTTACCAAAAAACGCCCACTCCTTTGTCTATCTGAGTATTGAATTAGATCCAAAAAACGTCGATGTGAATGTACATCCAACGAAACATGAAGTACAATTTCTTTACGAGGAACAAATTATAGAAAAGATAAAGAATACCATTGAGAAGAAACTTCTCAGTTGTAATTCATCTAGAGTTATGTATACACAGGTGAGAATAAAAAGAGTATATATATATATATANNNNTTTATATAA

Protein sequence:

>DPOGS216152-PA
MLLYINHRLVDSLSIRKAVDSVYATYLPKNAHSFVYLSIELDPKNVDVNVHPTKHEVQFLYEEQIIEKIKNTIEKKLLSCNSSRVMYTQVRIKRVYIYIXXFI-