| DPOGS216184 | ||
|---|---|---|
| Transcript | DPOGS216184-TA | 534 bp |
| Protein | DPOGS216184-PA | 177 aa |
| Genomic position | DPSCF300080 - 497662-498195 | |
| RNAseq coverage | 45x (Rank: top 71%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015841 | 1e-82 | 79.78% | |
| Bombyx | BGIBMGA004541-TA | 2e-74 | 74.86% | |
| Drosophila | l(2)efl-PA | 7e-39 | 48.86% | |
| EBI UniRef50 | UniRef50_Q5MGN8 | 7e-68 | 72.25% | Heat shock protein 3 n=7 Tax=Ditrysia RepID=Q5MGN8_LONON |
| NCBI RefSeq | NP_001036941.1 | 2e-80 | 78.86% | heat shock protein hsp20.1 [Bombyx mori] |
| NCBI nr blastp | gi|323541200 | 8e-83 | 85.21% | small heat shock protein 19.8 [Cydia pomonella] |
| NCBI nr blastx | gi|323541200 | 3e-80 | 85.21% | small heat shock protein 19.8 [Cydia pomonella] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | dme:Dmel_CG4533 | 4e-37 | ||
| K09542 (CRYAB) | maps-> | Protein processing in endoplasmic reticulum | ||
| InterPro domain | [12-24] IPR001436 | 1.5e-29 | Alpha crystallin/Heat shock protein | |
| [61-155] IPR002068 | 2.1e-29 | Heat shock protein Hsp20 | ||
| [47-156] IPR008978 | 3.5e-18 | HSP20-like chaperone | ||
| Orthology group | MCL17153 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS216184-TA
ATGTCGTTGCTACCTTTTATTCTCGGCTACGATCAGCCTCATCGACTTTTTGACCAGGACTTCGGCTTGGCTTTAACTCCAGATGATCTCCTTACTGTTGCCGTTTCCCCACTTTCATCACGAGACTACTACAGACCCTGGCGTCAGATGGCGGCTGCTGCGAGGGACGTCGGATCCACCATCAAGTCGGACAAAGATAAATTCCAAGTCAACTTGGACGTGCAGCATTTCAAACCTGAGGAAATAACTGTGAAGACTGCAGACGGTTACATAGTCGTGGAAGGAAAACACGAAGAAAAGAAAGATGAACACGGCTTTATATCCCGTCAGTTCACTAGACGATACGCACTCCCGGAAGGCTGTAACCCAGACACAGTAGAGTCACGGCTGTCTTCAGATGGAGTGCTGAGTGTTATTGCTCCGAAAATGCCATCAGTCTCGAAGAATGAACGAAGTGTTCCCATCGCCCAGACCGGACCCGTGAGGAAGGAGATCAAGGATCAGAATTCCCATGGTGAAGAAAATGGTCAATAA
>DPOGS216184-PA
MSLLPFILGYDQPHRLFDQDFGLALTPDDLLTVAVSPLSSRDYYRPWRQMAAAARDVGSTIKSDKDKFQVNLDVQHFKPEEITVKTADGYIVVEGKHEEKKDEHGFISRQFTRRYALPEGCNPDTVESRLSSDGVLSVIAPKMPSVSKNERSVPIAQTGPVRKEIKDQNSHGEENGQ-