| DPOGS216207 | ||
|---|---|---|
| Transcript | DPOGS216207-TA | 411 bp |
| Protein | DPOGS216207-PA | 136 aa |
| Genomic position | DPSCF300080 + 505874-506284 | |
| RNAseq coverage | 1x (Rank: top 95%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015841 | 1e-51 | 77.31% | |
| Bombyx | BGIBMGA004541-TA | 8e-47 | 77.27% | |
| Drosophila | l(2)efl-PA | 6e-22 | 43.70% | |
| EBI UniRef50 | UniRef50_B9VTS8 | 1e-44 | 77.27% | Heat shock protein 22.6 n=8 Tax=Obtectomera RepID=B9VTS8_BOMMO |
| NCBI RefSeq | NP_001036941.1 | 6e-47 | 76.64% | heat shock protein hsp20.1 [Bombyx mori] |
| NCBI nr blastp | gi|70905470 | 7e-50 | 82.24% | 19.8 kDa small heat shock protein [Choristoneura fumiferana] |
| NCBI nr blastx | gi|323541200 | 2e-48 | 82.24% | small heat shock protein 19.8 [Cydia pomonella] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | dme:Dmel_CG4533 | 4e-20 | ||
| K09542 (CRYAB) | maps-> | Protein processing in endoplasmic reticulum | ||
| InterPro domain | [12-24] IPR001436 | 7.4e-15 | Alpha crystallin/Heat shock protein | |
| [61-107] IPR002068 | 3.2e-13 | Heat shock protein Hsp20 | ||
| [47-105] IPR008978 | 8.6e-06 | HSP20-like chaperone | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS216207-TA
ATGTCTCTGTTGCCATTCGTGTTGGGTTACGAACGACCTCACCGTATCATCGATCAGGACTTCGGCTTGTCTTTGACTCCCGACGATCTACTGACTGTTGCCGTGTCTCCACTACTATCACGAGACTACTACAGACCCTGGCGTCAGATGGCGGCTGCTGCGAGGGACGTCGGATCCACCATCAAGTCGGACAAAGATAAATTCCAAGTCAACTTGGACGTGCAGCATTTCAAACCTGAGGAAATAACTGTGAAGACTGCAGACGGTTACATAGTCGTGGAAGGAAAACACGAAGAAAAGAAAGATGAACACGGCTTTATCTTTTTTTTCCTTCTCAATATTTACAAGTTCTTGTCTATATATCAATCGTATAGTGACATAATTTACTATGACAATATACAGACTCCCTAA
>DPOGS216207-PA
MSLLPFVLGYERPHRIIDQDFGLSLTPDDLLTVAVSPLLSRDYYRPWRQMAAAARDVGSTIKSDKDKFQVNLDVQHFKPEEITVKTADGYIVVEGKHEEKKDEHGFIFFFLLNIYKFLSIYQSYSDIIYYDNIQTP-