| New model in OGS2.0 | DPOGS211078 |
|---|---|
| Genomic Position | scaffold93:+ 8238-10546 |
| See gene structure | |
| CDS Length | 1365 |
| Paired RNAseq reads | 956 |
| Single RNAseq reads | 2462 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003206 (2e-82) |
| Best Drosophila hit | CG12264 (0.0) |
| Best Human hit | cysteine desulfurase, mitochondrial isoform a precursor (7e-177) |
| Best NR hit (blastp) | AGAP009094-PA [Anopheles gambiae str. PEST] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to cysteine desulfurylase [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0016226 iron-sulfur cluster assembly GO:0004123 cystathionine gamma-lyase activity GO:0005739 mitochondrion GO:0005737 cytoplasm GO:0006523 alanine biosynthetic process GO:0006534 cysteine metabolic process GO:0031071 cysteine desulfurase activity GO:0030170 pyridoxal phosphate binding GO:0005875 microtubule associated complex |
| InterPro families | IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site IPR010240 Cysteine desulfurase IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 IPR000192 Aminotransferase, class V/Cysteine desulfurase IPR016454 Cysteine desulfurase, NifS |
| Orthology group | MCL13549 |
Nucleotide sequence:
ATGTTTCGATTCTCCAAAATTATTGCGCCCAATCTTATAAAAGGTTTACAGCTTAAACCA
TTGCAGAATGAAAACGCATTTCTCGTGTTTCTACAAGGAAAGAAATTTTTATCAGATTCC
GCAAACGAAAGATTTGCTTTAAAACATGAAGAAATCGGTCGACCACTTTATTTCGACGCA
CAAGCAACAACTCCTATGGATCCAAGGGTCCTTGATGCGATGTTACCATATCTAGTCAGC
CTCCATGGCAATCCACATTCTAGAACACATGCCTATGGTTGGGAGAGTGAAGCAGGAGTT
GAAAAAGCTAGAGAACAAGTTGCGAGTTTGATTGGCGCTGACCCCAAGGAAATCGTATTT
ACATCTGGAGCCACAGAATCAAATAACATTTCTGTCAAAGGGGTTGCTCATTTCTATGCG
CCAAGAAAGAAGCATATTGTGACCACACAAATTGAACACAAGTGTGTACTGGATTCTTGT
CGAGCTTTAGAAGGAGAAGGTTTCAAAATAACATATTTGCCTGTAGGCCCAAATGGAATT
ATCAATATGAAAGATCTGGAAAATGCTCTCACACCTGAAACAAGCTTAGTGTCTATTATG
ACTGTCAATAATGAGATAGGAGTAATGCAACCGATTAGTGAAATTGGAGCTTTATGCAAA
AGCAAAAAGATATTTTTCCATACTGATGCAGCACAGGCAGTTGGCAAAGTACCATTAGAT
GTAAATAGCATGAATATTGACCTCATGTCAATTTCTGGTCATAAAGTCTATGGACCAAAA
GGAGTTGGAGCTCTATTTATCAGGCGTCGTCCAAGAGTTCGTGTTGAGCCAATCCAAAGC
GGTGGTGGCCAAGAAAGGGGTATGAGGAGTGGAACAGTACCTACACCTTTAGTTGTTGGA
TTAGGTGCAGCCTGTGAGTTAGCACAGCATGAAATGGCTTATGATCATGCTTGGATGGAG
ACTTTAGCCCAAAGATTCTTAGATAAAATTTACTCTAAACTATCACATGTCATTAGAAAT
GGAGATCCAAAGCAGACTTATCCGGGATGCATCAATTTATCATTTGCATATGTTGAAGGT
GAATCATTGCTAATGGCATTGAAAGATGTGGCTCTATCAAGTGGTTCTGCTTGCACATCA
GCGTCCCTCGAACCGTCATATGTTTTAAGAGCTATCGGTGCAGATGAAGATTTAGCACAC
AGTTCTATAAGATTTGGACTAGGAAGGTTCACGACGATTGAGGAAGTAGATTACACAGCT
GAAAAAACAATAAGACATGTAGAAAGGCTTAGAGAAATGAGTCCTCTCTGGGAGATGGTA
CAAGAGGGAGTCGACTTAAAAAACATTCAATGGTCTCAGCACTAA
Protein sequence:
MFRFSKIIAPNLIKGLQLKPLQNENAFLVFLQGKKFLSDSANERFALKHEEIGRPLYFDA
QATTPMDPRVLDAMLPYLVSLHGNPHSRTHAYGWESEAGVEKAREQVASLIGADPKEIVF
TSGATESNNISVKGVAHFYAPRKKHIVTTQIEHKCVLDSCRALEGEGFKITYLPVGPNGI
INMKDLENALTPETSLVSIMTVNNEIGVMQPISEIGALCKSKKIFFHTDAAQAVGKVPLD
VNSMNIDLMSISGHKVYGPKGVGALFIRRRPRVRVEPIQSGGGQERGMRSGTVPTPLVVG
LGAACELAQHEMAYDHAWMETLAQRFLDKIYSKLSHVIRNGDPKQTYPGCINLSFAYVEG
ESLLMALKDVALSSGSACTSASLEPSYVLRAIGADEDLAHSSIRFGLGRFTTIEEVDYTA
EKTIRHVERLREMSPLWEMVQEGVDLKNIQWSQH