| New model in OGS2.0 | DPOGS211746 |
|---|---|
| Genomic Position | scaffold10395:- 2506-4001 |
| See gene structure | |
| CDS Length | 531 |
| Paired RNAseq reads | 151 |
| Single RNAseq reads | 344 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007914 (2e-82) |
| Best Drosophila hit | hormone receptor-like in 39, isoform A (1e-59) |
| Best Human hit | nuclear receptor subfamily 5 group A member 2 isoform 2 (3e-14) |
| Best NR hit (blastp) | hormone receptor 39 [Bombyx mori] (2e-83) |
| Best NR hit (blastx) | hormone receptor 39 [Bombyx mori] (2e-88) |
| GeneOntology terms | GO:0005634 nucleus GO:0004879 ligand-dependent nuclear receptor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0003712 transcription cofactor activity GO:0003677 DNA binding GO:0016321 female meiosis chromosome segregation GO:0043565 sequence-specific DNA binding GO:0003707 steroid hormone receptor activity GO:0008270 zinc ion binding GO:0006919 activation of caspase activity GO:0035072 ecdysone-mediated induction of salivary gland cell autophagic cell death GO:0035211 spermathecum morphogenesis |
| InterPro families | IPR000536 Nuclear hormone receptor, ligand-binding, core IPR001723 Steroid hormone receptor IPR008946 Nuclear hormone receptor, ligand-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGCCACCAACGTCTATCGACGATCAGATATGTCTGTTGATAAACAGCTGGTGCGAGTTA
CTGGTGTTGTCCTGTTGCTACAGAGGAGTCAGCACGCCAGGGGAGGTGCGGGTGGGGGGA
GGCAGGGGAATAACGCTGCAGCAGAGCGCCAAGTATGGCCTAACTCCATGTATTGAACGT
ATGTTGAGTTTCACTGATCACTTGAGGAGGCTGCGTGTGGACCGCTACGAGTACGTCGCG
CTCAAGGTCATCGTGCTACTCACTTCAGATGCTCCAGAGCTTCATGAAGCAGAGAAAGTG
AGAGCTTCCCAGGAGAAGGCGCTGGCAGCCCTACAGGCCTACACCGCCACACACTCACCA
GACACACCTGCCAAGTTTGGTGAACTACTGCTGCGAATTCCAGAACTACAGAGAACTTGC
CAGTTTTTCATGCAAGTCGGAAAAGAAATGCTCAATCCAGCGAACAAGAGTAAGGACGGA
GAGGGACCGAGCTTCAACCTCCTCATGGAACTGCTTCGAGGAGATCATTGA
Protein sequence:
MPPTSIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLQQSAKYGLTPCIER
MLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELHEAEKVRASQEKALAALQAYTATHSP
DTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGEGPSFNLLMELLRGDH