| New model in OGS2.0 | DPOGS209646 |
|---|---|
| Genomic Position | scaffold154:- 64571-79890 |
| See gene structure | |
| CDS Length | 2949 |
| Paired RNAseq reads | 5461 |
| Single RNAseq reads | 12894 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006708 (2e-17) |
| Best Drosophila hit | CG7971, isoform D (2e-53) |
| Best Human hit | serine/arginine repetitive matrix protein 2 (3e-34) |
| Best NR hit (blastp) | hypothetical protein Phum_PHUM431970 [Pediculus humanus corporis] (8e-64) |
| Best NR hit (blastx) | hypothetical protein Phum_PHUM431970 [Pediculus humanus corporis] (3e-60) |
| GeneOntology terms | GO:0008150 biological_process GO:0003674 molecular_function GO:0005575 cellular_component |
| InterPro families | IPR013170 mRNA splicing factor, Cwf21 |
| Orthology group | MCL17127 |
Nucleotide sequence:
ATGTACAATGGAATTGGCTTAACAACGCCGAGAGGATCGGGAACTAACGGATATGTTCAA
AGAAACTGGGCATCAGTGAGGAAAACTAAAGATTCCGTGAATTACCGGACTGAGGAAGAG
ATATCGAAATTGGACTCAGCTTCTAATAAACAACCGAATCAGGAAATACTAGATCATGAA
AGAAAGAGGAAAATAGAGGTTAAATGTGCGGAATTAGAGGATTCCCTCGAAGGACAGGGG
TTGCCTAGGGAGGAGATCGCGGCCAGGGTAGCGGCTTTCAGGGCTAAGCTCTCGGAGACC
GGCGGAGCTGATAAAGATGTACGGAAGGATGAATATGGCAGAGTCGCTGTTCGAGAGACC
CATGCGGTGGCTGAGGCGCAACAGGAGAAAAATGCCCGTCTTAGGGACGCCTTTGGCATA
TCGCCTAGGTTCGTGGAGGGGACGAGTCTGGACCCCGAAAGACGCGCGCGGGAGGAGGCT
CTCAAATACCCCCTCGTGAGGACCCCCAGCCATGAGAGAGATGTTCACGTCACTAAGAAG
AAGAAGAAGAGAAGCACGTCGCCTGAAGCTAAAAAATCTAAGAAGAAAAAGTCAAAGAAG
AACAAAAAAGAGAAGCAAGAATCCAGTAAGAAGAAGAAGAAGCGTTCCAGGTCTCCGAAC
ACTGACAGCTCCAGCAGCTCAGAGGACAGCGACTCCAGCTCTGAAGGCGAAAAGCCGAAG
AAAAAGAAGAAAAAGTCAAGTAGTAGACGTCGTGCGAGCAGCGTACCTTCAAGCCGCGAA
AGTTCGCCAGTGAAACAGAATAAAAACAAGCAGTGGGAACGTCCAAATGAGTTTCAAGAG
AACGATGTACGTAATAGAAATCGCAACCGCGAGGAACGCAACAACAAATATGATGATCCC
TCAAGAAATTCCCATCAAATTGATTCAAAAAGACGCGGAGATCGCAGTCGGTCTACAGAA
CGGAGAACGTCGCCCAACTATAGACATAGAGATGATCGCAGGTCCCAAGAATACAAACAA
AAATCTTACGTCAATAAAATAGCTAATCGAAAGGAGCCCAAAGATGATTCAGCTAATTCT
AAAAACTCCAAGTCTAAACGTCAACGAACACCAACTGAATCCGAATCTGAAGAAACGTCT
AAGAAGACTGATCGAAGAGATAAAAGGCGGAGCAGAGATGTTAGCGTTTCACCACCGCCA
AGCAAAAGACGTAGAAGCTCTTCGGCCGATAATAAAAGATATGACTCGTATTACAGTAAG
AAGGAATTACCTAGAGAAGAATCTCGATACGAAAGTAAAAGAATGCGTAAGAGTGAATCG
CCTGACTGTAGAAGCAAACGGCATGAAGCATCGCGTAACAACAATGACAGGAATAATAGA
TCGGACCATGAAAAGAATCATAGAGATGATGAATCTAGAAAAAGAAGGAAAGACAGAAGT
TCTTCAAAAGAGAGACCAGAAACTTCTTATAAATATAAAGATCGATCACCAGTTAATAAA
AACAAAAAGGATTCAAAGAAAGAACCTGAGAGATATTACAAAAATAGTCGCGTGGAAGAC
TCGGAATCAGAATCCGAAGCGGACACACGAAAACAAAAGGATATCAAAGGGTCTAACAGT
AAATCTAAAGGTTCGAAAAGTAGAAACAAGTCACCACCTAGAGACAAAAGGAAAAGAAGC
CCTTCAATTGAAAATAGAAAAGACACCCCAGACCGGAGGGAGCGTAAAAATTCTCCTGAT
AGAAGACAAGAAGATAAGAAGACAGACAAATATAAATCGAGTTCAAAACTAGAAGAGAAC
AAAAGAGATGAAAGTAGGAAGAGAAAATCTTACACACCGGAAAAGAACTCGGCACGGAAA
CAATCGAGAAGCAAATCTAAATCTGTATCACAGGAGCGGAAAAGAGCAAAGAAAGATAAA
CAGAGAAGCAGATCACCAACTTTGAAATCTAAGAGAAATCCAGATAGACGGAATTCTTCT
GCGAGGTATGATAATAAAGATAAACATGATAAAGATAGAAATGACAAAGAAAAAAATGAT
CGCGATAATAACAAAGAAAGGAAAAAATCTCGATCGAAGGAACGAAGACGGAGCACTTCC
AGTCTGAGTTATTCTCCCGCCAGACGCAGCCCAGAAAGGTATCGCGATATAATAGAAAAG
TTACCAGAAAAGGACAAAAGGAAGTATATAAAATCACCCTCAGATTTGAAGCCAAAGGCA
AAGAAGAGTAAAGAGATAGCTGATAAATATAAACCCAAAGCCGTCTGCATGATAAGTTCG
TGTAGTGACAGTGATCAGTCTGAGGAAGATCTAGACGTACGGGCCAGGGCGAGGCAGGAG
GAACTTGATATTAAAGAGTTGATTAGATTGAAAGAAAAACTAGCGCAGATGGCCAAAGCG
TCCATAGAAAGGATGAGGACTGAAGAACAGGTTCAATCCACCTCCAATACTAATAACAAA
CAGAGTCCCATAGTAGTGGAATCTTCTAAGGTAGATGTCACTCCCAAGAAAATTGAAACT
CCCAAGAAGGACAGTCCAGTGAATGTAGAAAGCTCTCCTGAGGCGAAACGCGAAAAATCA
CGGGGCTGGTCGCGCTCGTCGTCACGTCGCTCGTCGCGGTCTAGGTCCAGATCTAGATCC
AGGTCGTCACGTTCCAAGTCACGCTCGTATTCATCTTCAAGACGTTCTCGGTCGAGTCGA
TCCAGTTCGTACAGCAGCAGGAGTTCCTCGCGATCCTCTCGCAGCTCGTCACGATCCACG
CGATCATCAAGAACTATGACGGGAGTGTACGGCGATTACCGCAGATCGAGCGGTTCTCGG
GCTTCCCGCTCGCCCTCCATCCCGAGGCGCGCCGGATCGCCCAGCTTCCTTGATAGGAGA
CGCATCACCAGAAAAAAGTCACGAAAATATAGCACGAGTTCTGAAGACACGAGTAGTAGC
TCGGACTAG
Protein sequence:
MYNGIGLTTPRGSGTNGYVQRNWASVRKTKDSVNYRTEEEISKLDSASNKQPNQEILDHE
RKRKIEVKCAELEDSLEGQGLPREEIAARVAAFRAKLSETGGADKDVRKDEYGRVAVRET
HAVAEAQQEKNARLRDAFGISPRFVEGTSLDPERRAREEALKYPLVRTPSHERDVHVTKK
KKKRSTSPEAKKSKKKKSKKNKKEKQESSKKKKKRSRSPNTDSSSSSEDSDSSSEGEKPK
KKKKKSSSRRRASSVPSSRESSPVKQNKNKQWERPNEFQENDVRNRNRNREERNNKYDDP
SRNSHQIDSKRRGDRSRSTERRTSPNYRHRDDRRSQEYKQKSYVNKIANRKEPKDDSANS
KNSKSKRQRTPTESESEETSKKTDRRDKRRSRDVSVSPPPSKRRRSSSADNKRYDSYYSK
KELPREESRYESKRMRKSESPDCRSKRHEASRNNNDRNNRSDHEKNHRDDESRKRRKDRS
SSKERPETSYKYKDRSPVNKNKKDSKKEPERYYKNSRVEDSESESEADTRKQKDIKGSNS
KSKGSKSRNKSPPRDKRKRSPSIENRKDTPDRRERKNSPDRRQEDKKTDKYKSSSKLEEN
KRDESRKRKSYTPEKNSARKQSRSKSKSVSQERKRAKKDKQRSRSPTLKSKRNPDRRNSS
ARYDNKDKHDKDRNDKEKNDRDNNKERKKSRSKERRRSTSSLSYSPARRSPERYRDIIEK
LPEKDKRKYIKSPSDLKPKAKKSKEIADKYKPKAVCMISSCSDSDQSEEDLDVRARARQE
ELDIKELIRLKEKLAQMAKASIERMRTEEQVQSTSNTNNKQSPIVVESSKVDVTPKKIET
PKKDSPVNVESSPEAKREKSRGWSRSSSRRSSRSRSRSRSRSSRSKSRSYSSSRRSRSSR
SSSYSSRSSSRSSRSSSRSTRSSRTMTGVYGDYRRSSGSRASRSPSIPRRAGSPSFLDRR
RITRKKSRKYSTSSEDTSSSSD