| New model in OGS2.0 | DPOGS214703 |
|---|---|
| Genomic Position | scaffold778:- 29657-31008 |
| See gene structure | |
| CDS Length | 798 |
| Paired RNAseq reads | 138 |
| Single RNAseq reads | 678 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004766 (1e-94) |
| Best Drosophila hit | ND |
| Best Human hit | phytanoyl-CoA dioxygenase, peroxisomal isoform a precursor (1e-18) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Nasonia vitripennis] (7e-71) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Nasonia vitripennis] (1e-70) |
| GeneOntology terms | GO:0001561 fatty acid alpha-oxidation GO:0055114 oxidation reduction GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GO:0046872 metal ion binding GO:0031418 L-ascorbic acid binding GO:0048244 phytanoyl-CoA dioxygenase activity GO:0005739 mitochondrion GO:0005777 peroxisome |
| InterPro families | IPR008775 Phytanoyl-CoA dioxygenase |
| Orthology group | MCL17619 |
Nucleotide sequence:
ATGGTTCGGTTAACTGAAGAACAGAAAAAGTTTTACAAGGAAAATGGATTTATTCATTTA
AAAAAGTTAATAAAAGACGGTGAACTAAAAACATTATCAGAGGAGTATGACGACTTGTTT
AGAAGAAAGAATCAACAGAAAATCGAGAGTCTTTGGGTTGGTGGAGATGATAACTTTAGA
GAAACCGGTAGCCCTTACACCGTTAAAGGTATTCACAACTTGCAATACCACAATGCTGTT
TTTGGTAAGTTATTGTATAATGACAGCCTTCTCGACGCACTAGAAGACGTTATGGATACT
AAGAATATAGCGCTACATCACACCAAAGCTCATTTCAAACCTCCAGAAAAAGGCGGTTCG
TATCCCATGCACCAGGATTATCCATACTTTCCATACAAAAACGACTCCATGGTAGCAGCC
TTTATTCATTTAGACGCTGCAAGTCCTAAAAATGGAGGATTGTTTGTGTACCCGGGCTCA
CACAAGCTGGGACCGCTGGAAGACTTTGGCCCTAAGGAAGGAAGCAATTTCCACTATGTG
GATCAGAGTAAATATCCAATCGAGAAGGCGATTCCAGTGGTTGCTGAAGCTGGGGACGTA
GTTATCTTCTCTTATCTTTTGATACACGGCAGTACACCGAACACATCTGATTGTCCAAGA
CGAATGTTCTTAGCTCAATATTATGATGCTCATGATTGTCCTGTTGGCGGAGAGCCAGGT
CAGCCTGGACGAGGATGGCTGCTGCGAGGAGTCAACCTGGACAGAGACGCTACTGTTGCT
AACCGAAGAAAAGATTAA
Protein sequence:
MVRLTEEQKKFYKENGFIHLKKLIKDGELKTLSEEYDDLFRRKNQQKIESLWVGGDDNFR
ETGSPYTVKGIHNLQYHNAVFGKLLYNDSLLDALEDVMDTKNIALHHTKAHFKPPEKGGS
YPMHQDYPYFPYKNDSMVAAFIHLDAASPKNGGLFVYPGSHKLGPLEDFGPKEGSNFHYV
DQSKYPIEKAIPVVAEAGDVVIFSYLLIHGSTPNTSDCPRRMFLAQYYDAHDCPVGGEPG
QPGRGWLLRGVNLDRDATVANRRKD