| New model in OGS2.0 | DPOGS214008 |
|---|---|
| Genomic Position | scaffold624:- 23497-26829 |
| See gene structure | |
| CDS Length | 1227 |
| Paired RNAseq reads | 592 |
| Single RNAseq reads | 1917 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000439 (2e-16) |
| Best Drosophila hit | CG2970 (1e-124) |
| Best Human hit | stomatin-like protein 2 (2e-109) |
| Best NR hit (blastp) | GH21699 [Drosophila grimshawi] (7e-139) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP009439-PA [Tribolium castaneum] (3e-135) |
| GeneOntology terms | GO:0016020 membrane |
| InterPro families | IPR001107 Band 7 protein IPR001972 Stomatin |
| Orthology group | MCL15298 |
Nucleotide sequence:
ATGTTCTCCCGATCTAAATTACTTTTCTCGAGGATCACACCTCTGAAAAATACTTTTAGT
GTAGATTTTCAAAATGGGGCCCGTGTGTTGTATGGTATATCATCAGTGAGAAATCGTTCA
ACAACTCCAATCAATACGATCATAATGTTTGTTCCACAACAAGAGGCGTGGATCGTAGAG
AGAATGGGTAAATTTCACAGATTACTAGAGCCAGGACTGAATCTGCTTTGGCCAATTGTA
GACAAAATTAAGTATGTGCAGAGTCTAAAAGAAATTGCTATAGATGTTCCAAAGCAGAGT
GCAATAACATCTGATAATGTTACTTTAAGTATTGATGGTGTGTTGTATCTACGAATTGTT
GATCCATACTTAGCTTCTTACGGAGTAGAAGATCCAGAGTTTGCTATAACACAACTAGCA
CAAACAACTATGAGGTCAGAGTTGGGACAGATATCACTTGACAAAGTTTTTAGGGAGCGA
GAGTCACTCAATGTTTCTATAGTCCATGCCATCAATAAAGCAAGTGAAGCATGGGGCATA
ACTTGTCTGAGATATGAAATACGGGATATAAAGCTGCCAACCAGGGTACATGAAGCCATG
CAAATGCAGGTCGAAGCTGAGAGAAGGAAACGCGCTGCTATATTAGAATCTGAAGGTGTT
AGAGCAGCCGATATTAATGTTGCCGAAGGAAAACGTCAATCAAGAATATTGGCTTCCGAG
GCCGAGAAGATGGAGCAGATAAATAAAGCGTCAGGTGAAGCTCAAGCCATGTTGGCGGTG
GCTGATGCTCGGGCTAAAGGGCTCACCATCATAGGGCAAGCGCTCGCACAAACGGATAGT
AAACATGCTGCCGCGCTTACATTGGCCGAGCAGTATGTGTCAGCATTTAATAAACTAGCA
AGGACAAACAATACTCTCATACTGCCAGCTAATGCAGGGGATGTTTCAAATTTGGTCGCT
CAGGCAATGTCAATATATTCAACGGTAACTTCACAAAGCAACCGCAACCAAGTATCTCAT
GGTGAGCCGATCATACCTGATATAATGGCTGAGGATCCTATGTACAAACTCAATATGCCA
AATGAGAAAGGTCTGACCATGGCTGGACAAGCCGTTCCAAATGAGGACTTAGCGGAGTAT
TTCTCTGACGATGAGGAGAGAGAAAAGGCATTGCAGACACAGAAAGACAAGAAAAAGCAT
TTGAACACATTAGAAAAAGATCCATAG
Protein sequence:
MFSRSKLLFSRITPLKNTFSVDFQNGARVLYGISSVRNRSTTPINTIIMFVPQQEAWIVE
RMGKFHRLLEPGLNLLWPIVDKIKYVQSLKEIAIDVPKQSAITSDNVTLSIDGVLYLRIV
DPYLASYGVEDPEFAITQLAQTTMRSELGQISLDKVFRERESLNVSIVHAINKASEAWGI
TCLRYEIRDIKLPTRVHEAMQMQVEAERRKRAAILESEGVRAADINVAEGKRQSRILASE
AEKMEQINKASGEAQAMLAVADARAKGLTIIGQALAQTDSKHAAALTLAEQYVSAFNKLA
RTNNTLILPANAGDVSNLVAQAMSIYSTVTSQSNRNQVSHGEPIIPDIMAEDPMYKLNMP
NEKGLTMAGQAVPNEDLAEYFSDDEEREKALQTQKDKKKHLNTLEKDP