| Genomic Position | scaffold10425:- 141-1435 |
|---|---|
| See gene structure | |
| CDS Length | 1017 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 3 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (1e-92) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (2e-97) |
| GeneOntology terms | GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGCTCGTTAACTTCCTCGAACGAGAGGGTCTCTTTTTGATGAACTCGTTCTTCAAGAAT
CAGCCCCAAAGGAATTGGACGTGGCAAAACCCCGATACTATAACTAAAAATGAGATCGAT
CTCATCATGACGGACAAGAAGCACATATTCAGAGACGTCTCCGTGATCAACAGTTTTAAT
ACCGGTAGTGATCACCGACTGGTACGAGGCTCTCTGAATATCAACTTTAATGCTGAACGT
GTCCGTCTAATGAAATCCAGGCTCCGACCTACCTTGCTCCATTCCATAATAAGATCCGAA
ACGTTCTGCCGTGGAAACCACAACGGACGTAAACCAAAACCTCGGGAATGTGGTTCGGAT
CCTCAGGGAAGAGGGTGCGAGTTTCTGTGCAATGCAGCAACGATCGAGCAGAACCGGGGG
TCAAAAGTGTTCGTACAATCTCTTGGAAGAAGCTACCTGACGAAGTTGACTACAGCAACT
GGAGAAGTCGTTGCTTCAATACCGGCAGTCCTTTCAGAATTGGAAGACTTCTATAGGTGG
CTCTACGCTTCGCAGACATCTCGGCCTGATCCAGTGTATGAGGGTCGTAGAGCCACATTA
ACACGCCACTTCTACGAACCTGCCAGAATGAGAACTCCGGCGGCGAGTAAGGGTGTGGTC
GTCCTGTTCTTCCAAAAGATAGACAAATCCCTGCTGAAGAACTATCGACCCATTTCCCTG
CTAAGCCACGTCTATAAGCTGTTTTCAAGAGTGATCACGAACCGTCTTGCGCGAAGACTT
GACGAATTTCAACCACCGGAACAGGCTGGGTTTCGGAGCGGATACGGCATTATAGACCAC
ATTCACACGGTGCGGCAGATTATACAGAAGACCGAAGAGTATAATCAGCACCCGTGTCTA
GCATTCGTGGACTATGAGAAAGCTTTTGACTCGATTGAAACCTGGTCTGTTCTGGAGTCC
CTGCAGCGTTGCCAAGTTGATTGGCGGTATATCCAAGTGATAAGATGTCTCTACTAA
Protein sequence:
MLVNFLEREGLFLMNSFFKNQPQRNWTWQNPDTITKNEIDLIMTDKKHIFRDVSVINSFN
TGSDHRLVRGSLNINFNAERVRLMKSRLRPTLLHSIIRSETFCRGNHNGRKPKPRECGSD
PQGRGCEFLCNAATIEQNRGSKVFVQSLGRSYLTKLTTATGEVVASIPAVLSELEDFYRW
LYASQTSRPDPVYEGRRATLTRHFYEPARMRTPAASKGVVVLFFQKIDKSLLKNYRPISL
LSHVYKLFSRVITNRLARRLDEFQPPEQAGFRSGYGIIDHIHTVRQIIQKTEEYNQHPCL
AFVDYEKAFDSIETWSVLESLQRCQVDWRYIQVIRCLY