New model in OGS2.0 | DPOGS212184  |
---|---|
Genomic Position | scaffold2588:- 30172-38330 |
See gene structure | |
CDS Length | 1434 |
Paired RNAseq reads   | 156 |
Single RNAseq reads   | 410 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010823 (0.0) |
Best Drosophila hit   | lysyl oxidase-like 2 (2e-132) |
Best Human hit | lysyl oxidase homolog 2 precursor (6e-92) |
Best NR hit (blastp)   | GA18160 [Drosophila pseudoobscura pseudoobscura] (1e-147) |
Best NR hit (blastx)   | GA18160 [Drosophila pseudoobscura pseudoobscura] (5e-147) |
GeneOntology terms    | GO:0004720 protein-lysine 6-oxidase activity GO:0005044 scavenger receptor activity GO:0055114 oxidation reduction GO:0016020 membrane GO:0005507 copper ion binding GO:0006464 protein modification process GO:0007155 cell adhesion |
InterPro families    | IPR017448 Speract/scavenger receptor-related IPR019828 Lysyl oxidase, conserved site IPR001695 Lysyl oxidase IPR001190 Speract/scavenger receptor |
Orthology group | MCL10922 |
Nucleotide sequence:
ATGAGTTTAGCATTAATTTTGTGTAAAGACTTAAGTGAAAATGAACGAGCAACGCGAGCG
GCTTTTGTTCAAAGGTTGTTGAACAGTAATAAATATCTGGAGGGGAGAATAAAGTTAGTG
GGAGGATCGAATAAATACGAAGGCAATGTATACATCTACCACGCTGGTAGATGGGGTGCA
GTATGTGATGATTCGTGGGATGCAGCTGCCGCCACAGTCGTTTGTGGAATTTTCAATAAA
AGTGGCGCAGCGACGCACGGTGGACAGTTTGGTGAAACTGAAGAAAAATTTTGGATGGAC
GACATTGTCTGCGAAGGTGATGAAAAATCATTAACAGAATGTGTATTTTCTGGATGGGGG
TCTTCTGACTGTGAAAGCAACGAAGCAGCCGGTGTCATATGTAACGATAAAATTAAAAAT
TCTATCCCCATCAAGATAGAAGAAGAGGAAAAAATAAAAATACATGAAGTCGTCGATGTT
AGAACAGTGAGCTTAAGGCTCGTGGGAGGCAGAAGTAGCAGCGAAGGAAGAGTCGAAATT
TATTACAATGGAGTCTGGGGTAGCATTTGTCCTGATGGTTGGACTATCTTTGAGGCTGCA
GCTGTTTGTCGGCACCTTGCCCTCGGATTTGCTGAACAAGCTTTACAGACTGATTACTTT
GGAAACTCTGCTATAATTTTAAGCGGTGTAGCTTGTGAAGGGAATGAATCTAATTTGTTT
ATGTGCAAACATCGACAATTTGGTCAGACGTATTGTCCAGGAGATATTGGACATGTGGCT
GCTGTAGTATGCACTCAGTACTTAGCGGATCTTCACCTTGATTCGTTGGCTATAGTAAGA
AGTGCCCATCTTCAAGACGTACCTATGTTTCAACTGCAGTGTGCAATGGAAGAAAACTGT
TTGAGTAAATCCGCTTATGAGATACAAAAAACAAATCCGAATTGGCAATTCGAAACGCGG
CGTCTTTTGCGTTTCACAGCAGCATCGCTCAATATCGGCAACGCAGAATTCAGACCTTAT
CTACCGAAACATTTGTGGCAGTGGCATTTATGTCATATGCACTATCACAGTATGGAGGTA
TTCGCTACTTTCGATATTCTGGATATGACGGGACGTAGAGTAGCTGAGGGACACAAAGCC
TCATTCTGCTTGGAAGACAATACCTGCCTGCCGGGGGTCGAGAAAAAATACTCATGCAGA
AATTACGGCGACCAAGGTGTGTCTATCAATTGCTCGGATATATATCTTTACAATATCGAC
TGCCAATGGGTCGATGTAACGGACGTGGCTCCAGGAGACTATACGTTCAAAGTTGCTGTG
AACCCACACGCCCGCGTTGCAGAACAAAACTATCACAACAATGCTGCTGTGTGCTCACTA
CGTTTGTCGGATACTAACGCTTACGTTTACTCGTGTAATATGGAAAAGCCATAA
Protein sequence:
MSLALILCKDLSENERATRAAFVQRLLNSNKYLEGRIKLVGGSNKYEGNVYIYHAGRWGA
VCDDSWDAAAATVVCGIFNKSGAATHGGQFGETEEKFWMDDIVCEGDEKSLTECVFSGWG
SSDCESNEAAGVICNDKIKNSIPIKIEEEEKIKIHEVVDVRTVSLRLVGGRSSSEGRVEI
YYNGVWGSICPDGWTIFEAAAVCRHLALGFAEQALQTDYFGNSAIILSGVACEGNESNLF
MCKHRQFGQTYCPGDIGHVAAVVCTQYLADLHLDSLAIVRSAHLQDVPMFQLQCAMEENC
LSKSAYEIQKTNPNWQFETRRLLRFTAASLNIGNAEFRPYLPKHLWQWHLCHMHYHSMEV
FATFDILDMTGRRVAEGHKASFCLEDNTCLPGVEKKYSCRNYGDQGVSINCSDIYLYNID
CQWVDVTDVAPGDYTFKVAVNPHARVAEQNYHNNAAVCSLRLSDTNAYVYSCNMEKP