New model in OGS2.0 | DPOGS216186  |
---|---|
Genomic Position | scaffold4608:- 2627-3163 |
See gene structure | |
CDS Length | 537 |
Paired RNAseq reads   | 541 |
Single RNAseq reads   | 3163 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004541 (6e-64) |
Best Drosophila hit   | lethal (2) essential for life, isoform A (8e-27) |
Best Human hit | alpha-crystallin B chain (1e-18) |
Best NR hit (blastp)   | 19.8 kDa small heat shock protein [Choristoneura fumiferana] (3e-84) |
Best NR hit (blastx)   | 19.8 kDa small heat shock protein [Choristoneura fumiferana] (7e-72) |
GeneOntology terms    | GO:0009790 embryo development GO:0009408 response to heat |
InterPro families    | IPR002068 Heat shock protein Hsp20 IPR001436 Alpha crystallin/Heat shock protein IPR008978 HSP20-like chaperone |
Orthology group | MCL11487 |
Nucleotide sequence:
ATGTCTCTGTTGCCATTCGTGTTGGGTTACGAACGTCCTCACCGTATCATCGATCAGGAC
TTCGGCTTGTCTTTGACTCCCGACGATCTACTGACTGTTGCCGTGTCTCCACTACTATCA
CGAGACTACTACAGACCCTGGCGTCAGATGGCGGCTGCTGCGAGGGACGTCGGATCCACC
ATCAAGTCGGACAAAGATAAATTCCAAGTCAACTTGGACGTGCAGCATTTCAAACCTGAG
GAAATAACTGTGAAGACTGCAGACGGTTACATAGTCGTGGAAGGAAAACACGAAGAAAAG
AAAGATGAACACGGCTTTATATCCCGTCAGTTCACTAGACGATACGCACTCCCGGAAGGT
TGTAATCCAGACACAGTAGAGTCACGGCTGTCTTCAGATGGAGTGCTGAGTGTTATTGCT
CCGAAAGTGCCATCAGTATCGAAGAATGAACGAAGCGTCCCCATCGCCCAGACCGGACCC
GTGAGGAAGGAGATCAAGGATCAGAATTCACAAGCCGGAGCTGGTGATAATAAATGA
Protein sequence:
MSLLPFVLGYERPHRIIDQDFGLSLTPDDLLTVAVSPLLSRDYYRPWRQMAAAARDVGST
IKSDKDKFQVNLDVQHFKPEEITVKTADGYIVVEGKHEEKKDEHGFISRQFTRRYALPEG
CNPDTVESRLSSDGVLSVIAPKVPSVSKNERSVPIAQTGPVRKEIKDQNSQAGAGDNK