| New model in OGS2.0 | DPOGS204814 |
|---|---|
| Genomic Position | scaffold519:- 78337-79482 |
| See gene structure | |
| CDS Length | 1146 |
| Paired RNAseq reads | 30977 |
| Single RNAseq reads | 114249 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001415 (0.0) |
| Best Drosophila hit | Ubiquitin-63E, isoform A (0.0) |
| Best Human hit | polyubiquitin-C (0.0) |
| Best NR hit (blastp) | Ubc protein [Rattus norvegicus] (0.0) |
| Best NR hit (blastx) | GF10254 [Drosophila ananassae] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0005737 cytoplasm GO:0006511 ubiquitin-dependent protein catabolic process |
| InterPro families | IPR019955 Ubiquitin supergroup IPR019954 Ubiquitin conserved site IPR000626 Ubiquitin IPR019956 Ubiquitin subgroup |
| Orthology group | MCL12975 |
Nucleotide sequence:
ATGCAGATTTTTGTAAAAACGCTTACTGGAAAGACCATAACTTTGGAAGTCGAACCTTCG
GATACTATTGAAAATGTTAAAGCCAAAATTCAAGACAAAGAGGGAATCCCACCAGATCAG
CAACGATTGATCTTTGCAGGAAAACAATTGGAGGACGGACGTACTCTTTCCGATTACAAC
ATTCAAAAAGAGTCTACTCTTCATCTTGTTTTGCGTCTTCGCGGAGGTATGCAGATCTTT
GTTAAAACCCTTACGGGTAAAACTATAACGTTAGAGGTAGAGCCTTCTGATACTATTGAA
AACGTGAAGGCTAAAATCCAAGACAAGGAAGGCATCCCCCCAGATCAACAACGTTTGATT
TTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCCGACTACAACATCCAGAAGGAA
TCTACACTCCATCTCGTACTACGTCTGCGTGGTGGTATGCAGATCTTCGTCAAGACCTTG
ACTGGCAAAACCATCACCTTAGAAGTCGAACCTTCAGACACAATTGAGAATGTAAAAGCG
AAAATCCAAGACAAAGAAGGTATCCCTCCCGACCAACAGCGTCTGATCTTTGCTGGTAAG
CAGCTGGAAGACGGCCGTACACTTTCTGACTACAACATCCAGAAGGAATCGACACTCCAT
CTCGTACTACGATTGCGTGGTGGTATGCAGATCTTCGTCAAGACCTTGACTGGCAAAACC
ATCACCCTAGAAGTCGAACCTTCAGACACAATTGAGAATGTAAAAGCGAAAATCCAAGAC
AAAGAAGGTATCCCTCCCGACCAACAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAAGAC
GGCCGTACACTTTCTGACTACAACATCCAGAAGGAATCGACACTCCATCTCGTACTACGA
TTGCGTGGTGGTATGCAGATCTTCGTCAAGACCTTGACTGGCAAAACCATCACCCTAGAA
GTCGAACCCTCCGACACCATAGAGAATGTAAAGGCAAAAATCCAAGACAAGGAAGGCATC
CCTCCAGACCAACAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAAGACGGCCGTACACTT
TCTGACTACAACATCCAGAAGGAGTCTACCTTGCATTTAGTTCTCCGTCTCAGAGGCGGA
ATTTGA
Protein sequence:
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGI