| New model in OGS2.0 | DPOGS203699 |
|---|---|
| Genomic Position | scaffold21:- 126835-129138 |
| See gene structure | |
| CDS Length | 1980 |
| Paired RNAseq reads | 367 |
| Single RNAseq reads | 903 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003492 (4e-180) |
| Best Drosophila hit | CG8272 (1e-71) |
| Best Human hit | leucine-rich repeat-containing protein 29 (2e-17) |
| Best NR hit (blastp) | f-box/lrr protein, putative [Aedes aegypti] (3e-124) |
| Best NR hit (blastx) | f-box/lrr protein, putative [Aedes aegypti] (2e-119) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR022364 F-box domain, Skp2-like IPR001810 F-box domain, cyclin-like IPR006553 Leucine-rich repeat, cysteine-containing subtype IPR001611 Leucine-rich repeat |
| Orthology group | MCL16521 |
Nucleotide sequence:
ATGGCAGCTAATAATCTCCCATATGAGGTCCTAGTTTATCTTTTTAAATATTTACCAAAT
TCTGATAGAAAGGCGGCTAGCGAAACTTGTCAATCTTGGTATCTCGCCGCTAATGACTAC
TACTTTTTAAAAAACAAAACTCTTGTATTTTATAGAACAGACTTGCTAAAAGAGGCTTCA
CCACTGCAAGTAATTGAAAATACAATAATACCATATTACAATTTTATATTCAATGAGGTA
GAACTGTCCCAAAAGACAAATTATTTTTGGGAAAAAATTGGAGAAAACATAAGAAGTTTG
ACAATAAGAAAATGTGATATTCATGAAAAAACTATTGATTATATTTTAGAGAAATGCACA
AGCATAGAAACATTGAACATACAATGCTGCAAGGAACTCTTTATGTCCGGATGTCTATTG
GAGAAGACAAACGGTGTGATAGCCAATAGTTTTAAGAACTTGAAAAATCTAAACTTGTCT
GAAAACAAATATATAACTGATGCATTATTCTATAGGTTTGTCAAATCTGCACCAGAACTA
GAACATCTATGTCTGTCATTGTCCCCAATACAATTCCATGCTGGATTTGTTAAGAAATTT
TACTCGCAGACTACTAATATATTTGAAAATCCATCAGAAAGTGTTTTCACCTTCTATTTT
GTACAACAGTTTATATTATCGAGGGCGAATAAAATAAAAAAGTTAGTATTTTCTAATACC
CTCATTGATGGCGCCGGTTTGAAGCAATTGTCTGAAATTCCTTATTTAATGCTAGAAAGT
CTACAGTTAAATACTTGTGACCAACTGACAAATGCTGGAATTATTTCTTTGGCTACACAC
CAACATTCTTTGAAGGAACTAGATATTGGTCTCTGCACAAGAGTTACCGACCAATCTTTG
ATGTACATATGTAATAATCTTGTTAATTTGGAATATCTTAATATACAGAGTGAATTAAAT
AAGCTTAAAAAACTGAAAAGGGTTAATATTTCTCAATGTGAACTTATCACAAAAGACGGC
ATAAAAGTGGGATTGTGTAGTGACGACGAAAATCTTATTATGGAAGAGTTAGATATAAAC
TCATTAAACAATATAGAACAAACTGGTGTTATTATGCTATCGGAAAAATTAAGGAATCTG
ACATATATGGATTTAAGCTTCTGTTTTAATGCTGTGACAGACACAACCATACAAGTGATA
TTTAGAAATCAAATAAAATTACACACATTAAAAATAAACTACTGTGATAAAGTGTCGGAT
GTCGGCCTTACTGGGATGGGGAAAGTGGAGTCAGAGGGTGACGATGATGGTCCCGTTATG
TCCAATTATGGTGAAACTAATTCACACAGCAGAATACACCTAGGCTCTAGGGCTGAGGAA
GAAATAATTCGCGACGCACAGAGGAAGCGAGAGGTGCAAAGAATGTGTGAAAAATTAACC
ATGGACTCTTATACCGGATATTCATTGGCTCGCATTAAATCTCTAAGGGAATTAAATATC
AGTGGCTGTAATAGAATAACCGATGTCAGTTTGATATACGCTTTCGCCTTCAAAGAACTC
CAGAGTTTAAATTTAAGCAGATGTCAACAAATTACTGTCGATGGAATCAAATACCTTGTT
AGAAATTGTCCAAGCATTGAATATTTAAACCTAAATGATTGTTACAATTTAAAAGATGAT
GCCGTCATTGAAATCGTTAAAGGACTGCCGAGATTGCAATATCTGGAACTCAGAGGTTGC
AATCAACTAACCGATAAAACTTTGGAAGCTATTCAGGAACATTGCAAAATACTAAAAGTA
TTAGATATCCAGGGTTGTCACAATATATCAACTGAGTTAGGATGTGCTATAGGTTCTTTG
CCAACCCTGCATACTGTATTAATGTCGAAACCGGGACCTTATATAACTGATGGTGTCAAG
AATAGGGCTCCCGCACCACCCTTATTACCGTCTTTGTTGAGAAAATTAAGATTACATTAA
Protein sequence:
MAANNLPYEVLVYLFKYLPNSDRKAASETCQSWYLAANDYYFLKNKTLVFYRTDLLKEAS
PLQVIENTIIPYYNFIFNEVELSQKTNYFWEKIGENIRSLTIRKCDIHEKTIDYILEKCT
SIETLNIQCCKELFMSGCLLEKTNGVIANSFKNLKNLNLSENKYITDALFYRFVKSAPEL
EHLCLSLSPIQFHAGFVKKFYSQTTNIFENPSESVFTFYFVQQFILSRANKIKKLVFSNT
LIDGAGLKQLSEIPYLMLESLQLNTCDQLTNAGIISLATHQHSLKELDIGLCTRVTDQSL
MYICNNLVNLEYLNIQSELNKLKKLKRVNISQCELITKDGIKVGLCSDDENLIMEELDIN
SLNNIEQTGVIMLSEKLRNLTYMDLSFCFNAVTDTTIQVIFRNQIKLHTLKINYCDKVSD
VGLTGMGKVESEGDDDGPVMSNYGETNSHSRIHLGSRAEEEIIRDAQRKREVQRMCEKLT
MDSYTGYSLARIKSLRELNISGCNRITDVSLIYAFAFKELQSLNLSRCQQITVDGIKYLV
RNCPSIEYLNLNDCYNLKDDAVIEIVKGLPRLQYLELRGCNQLTDKTLEAIQEHCKILKV
LDIQGCHNISTELGCAIGSLPTLHTVLMSKPGPYITDGVKNRAPAPPLLPSLLRKLRLH