| New model in OGS2.0 | DPOGS204638 |
|---|---|
| Genomic Position | scaffold4243:- 22722-29657 |
| See gene structure | |
| CDS Length | 2424 |
| Paired RNAseq reads | 1939 |
| Single RNAseq reads | 4716 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009466 (2e-103) |
| Best Drosophila hit | bonus, isoform A (1e-90) |
| Best Human hit | E3 ubiquitin-protein ligase TRIM33 isoform alpha (1e-41) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC007718 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (3e-106) |
| GeneOntology terms | GO:0003713 transcription coactivator activity GO:0005634 nucleus GO:0007422 peripheral nervous system development GO:0005515 protein binding GO:0008270 zinc ion binding GO:0048813 dendrite morphogenesis GO:0048666 neuron development GO:0007411 axon guidance |
| InterPro families | IPR000315 Zinc finger, B-box IPR003649 B-box, C-terminal IPR001965 Zinc finger, PHD-type IPR001487 Bromodomain IPR013083 Zinc finger, RING/FYVE/PHD-type IPR019786 Zinc finger, PHD-type, conserved site IPR019787 Zinc finger, PHD-finger IPR011011 Zinc finger, FYVE/PHD-type |
| Orthology group | MCL11558 |
Nucleotide sequence:
ATGATCGACCAGCGGTTCGTGATGGAGAAGGTGGCCCTCGAGCACACAGGCAACAACGGT
TCCCTGAGCGGGGAGCAGGCCTGTAACAGCTGCGAGGACCCGGAGCCGGCCACCAGCTAC
TGTGTCGACTGTGCAGAGTTCATCTGTGACAACTGTGTACACGCGCACCAGAGGCTTAAG
ATCACCAAGGACCACACCATAAAGTGTAAGGAGGAGGCGGTGTCGGAGTTGCAGGCGGCG
CAGGCGGGCGCGAGGACGGCTCACGACATGTACTGCAGGGATCACCCCCAGGAGCGTTTG
ACGTTGTTCTGTGAGACGTGCGACCGCCTGACCTGCCGGGACTGTCAGCTGCAGCATCAC
AGAGACCACAAGTACCAGTTCAGCACAGAGATGGCGGCGCAGGCTCGGGGCAGTATCGCA
GCCCTACTGTCTGAGGTGAGCTACAAGCGGGTGCTGTTGGGGTCCGCCATGAAGGTCATC
AGGGACCGCCAGCTCCTCATAGCTGACAAGAAGAAGGCGCTGGTCCACGAAATCACACAG
ACTGTCGTCAAGTTAACGAACGCCATCAACACTCGCGGCAAGCAGTTGGTGTTGCGCCTG
AACGAGGTGTGTGACGCCAAGCAGAGGACGCTCAGCGAGAAGAAAGACGCCCTGGAACAA
CTGGCGGCCATCACCGACCACTGTGTGGACTTCGTTAACGCTGCACTGGAACAGGGCAGC
GACACAGCGGTACTCCACAGTAAGCGGGCGGTGTGCGCTCACCTACAGAGGATCAAGAGT
CGAAGGGCGGACATACCCAACCCGGAAATACCCGTCCGGATATCACTGGCGCTCGACAAA
CTACCTGACCTTATCAGAGTGCTTTCAAACATCGGAGCGATAGTGGTGGATGGGAAGGTG
GACGGGGGGTCGGGGGGGAGCAGCGGCTCGGCGGGGGTAGGAGGAGCGGCGGGGGGAGGG
GCAGCGGCCGGCAACAGCGGGGCGGGGGCTCTGGGGCCCTACCACGCCGCCGCGCCTCCG
CACTCCGCGGTAGTCGCCCTGCAGCAGGTCGCCATGCATCAGTCGTTCGTGCAGGCGGTG
TCGGGGCCGGGGAGCGCGGTCGGCAGTCCTGGCGGCGCGGCCTACCTCGGCCTGCAGAGA
ACGCGCGCCCACACGCCGCTGAGACACCCGCACGTCACCTCCACCACTCACCCTCACCAT
CTCCACGGGATGAACGAGATGAACCTCAACCTGCGAGGCCTGCTGAACGCGAGCGGTGTG
AGGCGCGGCCCGCCGCCCGGCCCCGGGCCCGCCACCGCCCCGCCGACGCACGCCATGCAG
CACCCCTACCACCAGATAATGGGCGGGTACGGGAACAATGTGTACGGGAGCGGAGCGCCC
AGCGGCAGGAGGAGCGGTGGGCCGAGGACACCTTCGCCCGCTCCGCACCACCCGCCCGCC
CCACACCACACGCACCAGCCGCCGCCCGCCAAGTGGCACATCCCGCAACACGGACTGGCC
AATGTGGACATGCTGTCGGTGGGTGTGTCGGAGGGCGGCCTGACCCCGGCGGCCGACTAC
AAGATAACCCTGGGCCGAGCGCGCGCCACGTCCGCCGTCACCTCCACCAACCCCAAGACA
CCCAGCCCCAGTCTCAATGGGGCGGGCGCGTCGGAGTTGGACAAGGTGTGCGCGGAGTCG
GTCCAGGACTTGATGGCTACCATCGCCAAGCTGGACTCCAACGGCGTGCAAGTGGTGGCG
GAGGCGGCGGGCGCGGCGGGGGCTAACTCCCCGGCCATCGTGCACTCGTCCACGGACACG
GGCGGAGCCCCGGCCGTCGCCGCGCCCGCCGCAGGGGACCCCAACGAGGACTGGTGCGCC
GTCTGCATGGACGGTGGGGAGCTCATGTGCTGCGACAAGTGTCCCAAGGTGTTCCACCAG
TACTGCCACATACCCACCATCGAGAAACTGCCAGAGGAGACGGAGTCTTGGCAATGTCTG
TTGTGTGTTAACTTCGCGGAGGAACATGCGTCCGAGGAGTTGGAGGTGGAGGGCGAGTTA
GGGAAACGCGGCCGGAAGATCGTGGAGCGGATCACCCTGGAGATGTACTGCCAGTACGAA
CTGTCGCTAGCCTTCAGAGAGCCCGTTCCCACCACGGACATACACTATCACAACGTGATC
GAGCGCCCCATGTGTCTGGACACGATCCGCGCGCGCCTCCAGCCCCGCTCGCCCTCTCGC
TACACCCGCCTGGACCAGTTCGTGTCGGACTGTCGACTGCTGTTCCGCAACGCTTACAAA
TATAACACGCCGGACTCTCAAGTGTACAAGGACGCGAAACGTCTGGAAGAGTTCTTCGAC
TCGCAGCTGGTGAAGTGGCTGCCGGAGTTCGCGTACTGGAACGGCGAGGGCGAGCCGCCG
AGGAAGCGGCCGCGGTGTGACTGA
Protein sequence:
MIDQRFVMEKVALEHTGNNGSLSGEQACNSCEDPEPATSYCVDCAEFICDNCVHAHQRLK
ITKDHTIKCKEEAVSELQAAQAGARTAHDMYCRDHPQERLTLFCETCDRLTCRDCQLQHH
RDHKYQFSTEMAAQARGSIAALLSEVSYKRVLLGSAMKVIRDRQLLIADKKKALVHEITQ
TVVKLTNAINTRGKQLVLRLNEVCDAKQRTLSEKKDALEQLAAITDHCVDFVNAALEQGS
DTAVLHSKRAVCAHLQRIKSRRADIPNPEIPVRISLALDKLPDLIRVLSNIGAIVVDGKV
DGGSGGSSGSAGVGGAAGGGAAAGNSGAGALGPYHAAAPPHSAVVALQQVAMHQSFVQAV
SGPGSAVGSPGGAAYLGLQRTRAHTPLRHPHVTSTTHPHHLHGMNEMNLNLRGLLNASGV
RRGPPPGPGPATAPPTHAMQHPYHQIMGGYGNNVYGSGAPSGRRSGGPRTPSPAPHHPPA
PHHTHQPPPAKWHIPQHGLANVDMLSVGVSEGGLTPAADYKITLGRARATSAVTSTNPKT
PSPSLNGAGASELDKVCAESVQDLMATIAKLDSNGVQVVAEAAGAAGANSPAIVHSSTDT
GGAPAVAAPAAGDPNEDWCAVCMDGGELMCCDKCPKVFHQYCHIPTIEKLPEETESWQCL
LCVNFAEEHASEELEVEGELGKRGRKIVERITLEMYCQYELSLAFREPVPTTDIHYHNVI
ERPMCLDTIRARLQPRSPSRYTRLDQFVSDCRLLFRNAYKYNTPDSQVYKDAKRLEEFFD
SQLVKWLPEFAYWNGEGEPPRKRPRCD