| Genomic Position | scaffold3371:- 8951-11500 |
|---|---|
| See gene structure | |
| CDS Length | 1653 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 1 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002632 (3e-07) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (5e-82) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (2e-79) |
| GeneOntology terms | GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGCAACCAAATGCAATGGACGGCCCCGAGTCCCCGGCAGCCCCACTGGCCCCGACTACG
GTAGTGGTCTCGGTAACGGTGGGGCTAGGAGTGCGAAGAATCCCCGGCAGATGCCCGGCT
ACCAAGAGGGTGACCAACAATCCCAAGGTGGTGTCGGATTTCTCGTTCACAAAAGGTACT
CATAAGAGGTACTCATTGAAGGTCGTTCAGGGATATGCGCCGACTTTGTCACGCCCAGAT
GAGGAAGTAGAGTCTATGTATGAGGACATTAGTAGGGCCATACATACTAGCAAAACTCAC
TTCAATGTTGTTATGGGAAACTTTAATGCGAAGCTAGGCAAGAGAAGTGCTTACGAGTTG
AAAGTGGGGGACTTCCGAACTCAGTGGCTCTCCGACTGCACCCTTAAATTTATTGCTGAA
CGACGCTTGCATAGATTGCAGTCTCTTGATGATGCTGAGTCGCATGGCCAGCTTAATAGA
CATATCTGGAAATCCTTGCGTCACGACATTCGTAACTTCTATACTGCTCGTATCAAAGAT
AAAATTGAGCGAAACAAAGGCTCCAAAGTGTTCGCAAGGGATATGTCTATTGGGCAAAGC
CAGATGACAAAGTTGAAGCGGGATGATGGCAGCCTAGTGTCTATAAAAGCGGAAGTCTTA
AGGGAAGTTGAGAACATCTATGTACGACTCTACGATTCGGTCGCAAAGCCTGCTTCTAGT
ACGGCTACAGACCCAAGAACTAAATTAACCCGACACATTGCCGAGGAGATCCCGGACATC
AGCCTGTTTGAGATTGAGATGGCCCTTAAACAGTTCAATAACAACAAGGCACCGGGTGAA
AACGGAATTACTTCTGAACTTCTGAAAGCGGGTGGATCACCGGTACTTAAAGTCATTCAA
AAGCTCTTCAATTCTGTCTTGTTTGAAGGTACCACGCCTGAGGCATGGAACAAGAGCGTG
GTGGGGGTGCTGTGCTTCAAAAAAGGTGATAACACCCTATTGAAGAACTACAGACCCATC
TCGCTCTTGAGCCACGCTTACAAGCTGTTTTCTAGGGTCATTAAACGCCACTATGTCGGT
CTGACTTCAGAAACAGAGTTCGAGGCCGATTCCCTTAAAAAGAGGCGTAAGACAGGGAGA
CATCATATCTCCGAAACTATTCACGGCGGCTTTGGAAGACGCCTTCAAGCTTCTGGATGG
GAAGGACTGGGCATCAATATAAACGGCGAATACATTACTCACCTTCGGTTCGCCGACGAT
ATCGTAGTCATGACAAAGTCGATGGAGGAACTCAGTGCGATGCTCGAAGGCCTCAATCGT
GTCTCCCAACGGGTAAGTCTTAAAATGAACGAGGACAACACGAAACTCATGTCTAATGTC
CATGTCGCACCTACCCCTGTTATGGTTGAGAACTCGGTACTTGAAGTTGTTGACGCGTAT
GTTTACCTGGGACAGACAGTCCAGATAGGAAGATCCAACTTCGAGAAAGAGGTCAATTGC
CGAATCCATCTCGGATGGGCAGCGTTCGGGAAGCTCCGTAACGCCTCTTCGTCCAAATTA
CCTCAGTGCCTTAAGACGAAGGTATTTAATCAGTGTGTGTTGCCAGTGATGACGTACGGA
TCCAAAACGTGGTGCTTCACCGAAGGCATTTGA
Protein sequence:
MQPNAMDGPESPAAPLAPTTVVVSVTVGLGVRRIPGRCPATKRVTNNPKVVSDFSFTKGT
HKRYSLKVVQGYAPTLSRPDEEVESMYEDISRAIHTSKTHFNVVMGNFNAKLGKRSAYEL
KVGDFRTQWLSDCTLKFIAERRLHRLQSLDDAESHGQLNRHIWKSLRHDIRNFYTARIKD
KIERNKGSKVFARDMSIGQSQMTKLKRDDGSLVSIKAEVLREVENIYVRLYDSVAKPASS
TATDPRTKLTRHIAEEIPDISLFEIEMALKQFNNNKAPGENGITSELLKAGGSPVLKVIQ
KLFNSVLFEGTTPEAWNKSVVGVLCFKKGDNTLLKNYRPISLLSHAYKLFSRVIKRHYVG
LTSETEFEADSLKKRRKTGRHHISETIHGGFGRRLQASGWEGLGININGEYITHLRFADD
IVVMTKSMEELSAMLEGLNRVSQRVSLKMNEDNTKLMSNVHVAPTPVMVENSVLEVVDAY
VYLGQTVQIGRSNFEKEVNCRIHLGWAAFGKLRNASSSKLPQCLKTKVFNQCVLPVMTYG
SKTWCFTEGI