| New model in OGS2.0 | DPOGS202230 |
|---|---|
| Genomic Position | scaffold3998:- 12734-17192 |
| See gene structure | |
| CDS Length | 1257 |
| Paired RNAseq reads | 11 |
| Single RNAseq reads | 70 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 (1e-07) |
| Best NR hit (blastp) | hypothetical protein BRAFLDRAFT_221898 [Branchiostoma floridae] (2e-13) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (6e-10) |
| GeneOntology terms | GO:0050896 response to stimulus GO:0005515 protein binding GO:0042462 eye photoreceptor cell development GO:0007601 visual perception GO:0005929 cilium GO:0005930 axoneme |
| InterPro families | ND |
| Orthology group | ND |
Nucleotide sequence:
ATGATGACCGAAGAAGTTGTACCCATAGCACTGAAAAGAGCCGATGCCAAGTTACGTCTA
CGAGATTCGTATACACCGAAGTGCATATTCACGCTGCATGTCGGCACTGTGGTGCTATCC
GACCAGGCGGTCCTTCTCTCTCACGACAAGTCGTTACTGTTAACTTGGCGCTTCTACAAT
CAGACGCCATCCATGACTCGTCTACTGGCCGGACGAGTTATGAATTTCGACTTCTCAACA
GAATACGATCTCAAGATAACTGAACATTTCCTGTACTATTTAAAACATGAAGAGATGCCG
ATAACAATATCAGAGATGGACAAACAGGACGAGGCGTTCGCTATCTGTTCCCTGCCGTTA
AGGGATGCTCTGCTTCATCCGAACAGAAGAGTTGATATGTCACTCGCTCTGGTGGCAGGC
AGACAGATGACCAGAGAGCGTGGCTCGGCAGACTGTGAGGAAGCAGGGGTGCTAGATGTA
TGGTGCATGCTCAGGGTCGACCCTAGCGCTTTGCCCGCTATCAACACGGCCATCATCAGG
CCCTCGTCCTTGAAGAGCCAGCAGCACTCTTCATCCATCATGGAGCAGATGCTGGATGAC
GACCAATCATCCGACTACCGGTACTCCCGGGACCTGCACAGGCGCAGCAAACGAACGTCT
GAAGATGTTCAATCGAGTCGCAGCGAGGCGATGGACAAAGCACCAGAGACCGTCGTAAGC
ACCGACGAAAACCTTCAAAGTCTGGACATCACAATACAGTGGCTAGCTCTCAATGAAGAC
TGTAAGGCGATGATTGATCCCAATGTGAGGAGGTTGTATGTAGCATACACCTTCCTTGGC
CGAAGCGGTGCTGACATGGAGACGCCCGTCAGTCTGCCGAAACCGAAGCATTACATGGAC
AAATGTCACTTTCTGTTCAAGAAAACGTTCATAGTGAACGAGTGTGATATGGTGACGTTG
GGTCACTTGGCTCAGTGTCACGAGCCGGCCAACGAACCTGACCCTCAGTGCGCGGTGGTG
TTCAGCGTAGTCAGCGAACCCGCCGAGGATCCACTAGGCCTGGACAGCTGTGAGGATATC
GGCTACGCGTATCTATACTTGGGGGATGTGCTGGCCAGCAGTTCCACTGAGACGTATAAC
GGGGTGCTGGTGGTTCGGGATCCTCGTGGTGTGGACTGCGGAGCCCTGGCCCTTAGGCTC
GATGGCCTGACTCTGCTGCGGCGATGCAGGGATCTGGCCGGGAACGCCAGTCATTGA
Protein sequence:
MMTEEVVPIALKRADAKLRLRDSYTPKCIFTLHVGTVVLSDQAVLLSHDKSLLLTWRFYN
QTPSMTRLLAGRVMNFDFSTEYDLKITEHFLYYLKHEEMPITISEMDKQDEAFAICSLPL
RDALLHPNRRVDMSLALVAGRQMTRERGSADCEEAGVLDVWCMLRVDPSALPAINTAIIR
PSSLKSQQHSSSIMEQMLDDDQSSDYRYSRDLHRRSKRTSEDVQSSRSEAMDKAPETVVS
TDENLQSLDITIQWLALNEDCKAMIDPNVRRLYVAYTFLGRSGADMETPVSLPKPKHYMD
KCHFLFKKTFIVNECDMVTLGHLAQCHEPANEPDPQCAVVFSVVSEPAEDPLGLDSCEDI
GYAYLYLGDVLASSSTETYNGVLVVRDPRGVDCGALALRLDGLTLLRRCRDLAGNASH