| New model in OGS2.0 | DPOGS207857 |
|---|---|
| Genomic Position | scaffold3574:+ 15202-23992 |
| See gene structure | |
| CDS Length | 2163 |
| Paired RNAseq reads | 2248 |
| Single RNAseq reads | 5603 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009941 (5e-70) |
| Best Drosophila hit | CG12082 (4e-144) |
| Best Human hit | ubiquitin carboxyl-terminal hydrolase 5 isoform 2 (8e-139) |
| Best NR hit (blastp) | PREDICTED: similar to ubiquitin carboxyl-terminal hydrolase 5 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ubiquitin carboxyl-terminal hydrolase 5 [Tribolium castaneum] (7e-172) |
| GeneOntology terms | GO:0016579 protein deubiquitination GO:0004221 ubiquitin thiolesterase activity GO:0006511 ubiquitin-dependent protein catabolic process GO:0008270 zinc ion binding |
| InterPro families | IPR001607 Zinc finger, UBP-type IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 IPR013083 Zinc finger, RING/FYVE/PHD-type IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site |
| Orthology group | MCL11167 |
Nucleotide sequence:
ATGGCATCTTTAGATCTTTTAGTGCAGCACTTACCTAAAATCACAATTCCAACTTCCCAG
CAGTTGGTTTACAAGGATGAATGTGTTTATTCTTTTGACAATCCGGAATCGGAGACGGGT
CTGTACGTGTCACTGACGTCATTTTTAGGCTTCGGAAGAAATTACGTGGAACAATATTTC
CAGAAAACAGGCAATGCGGTGTTTTTACACATACTAAGAGAGAAGAAACCCATCCCGGAG
CCAGAACAAACAGGAGATGGTCCAGAAAAGAAAATAACTCGCCTGGCGATCGGTGTGGAG
GGTGGCTTCGACCCTGACTGTGGCAAACCAAAGTACACTTACACAGAACACTACAACGTT
GTGGTGCTGCCGGGGTTTCACACATTCCCCTGGCCTAATGACGCTTTACCTGACGTGGTA
AAGAAATCTGTTCAGGCTGTGCTAGATGCGGATTCTCCATTCAAACTCGCCGAGGCGGAG
GCTTTACACGGCACCTGGGATGGGGAGAAGCGAGAAGTATCCGTCCACTCGGTTAACTTG
AAGCAGTTAGATAACGGCGTTAAAATACCACCTTCCGGCTGGAAATGTGCCAAGTGTGAT
CTAACGAACAACTTGTGGTTGAACCTGACCGACGGGTCCATATTGTGTGGGAGGAGATTC
TTCGATGGCTCCGGCGGAAACGATCACGCGGTGGAGCATTTCCGCGCGACCGGATATCCG
CTCGCTGTGAAGCTTGGCACGATAACAGCTGACGGTACTGGCGACGTGTACTCGTACGCC
GAAGACGATATGGTCGAGGACCCCTACCTGGCGGAACACCTCAAACACTTCGGCATCAAC
GTCCAGCAGTTGCAGAAGACGGAGAAGTCGATGGTGGAGTTGGAGCTGGAACTGAACCGC
CGTACGGGCGAGTGGAACACCATCCAGGAGTCTGGAAGTGAGCTGCGACCGCTGCACGGA
CCAGCACTCACAGGTGTCAACAACCTCGGCAACTCCTGTTACATCAATAGTGTGGTCCAG
GTGCTCTTCCGTATGCCGGACTTCATACGTCGCTACGTGGAAGGCGCGCCAGAGATATTC
TCGACCTTCCCCGAGGATCCTGCTAACGATTTCAACGTGCAGACCGCTAAATTGGGTGTT
GGTCTCATATCCGGTCGCTACTCGTTCCCTACATCCGGCGGCGGGCAGGCGGGAGTGTCG
CCTCACATGTACCGCGCGCTGGCCGGTCGAGGACATCGAGAGTTCAGCTCCAAGAGACAG
CAGGACGCACACGAATTCTACCTCCATCTCCTGACCCTTATTGAGCGTAACAGCCGTCAC
AAGCCGAACCCGGCGGACTGTTTGAAGTTGACCGTGGAAGAACGTGTCCAATGTACGGAG
TCTCTCGGCGTGAGGTACACCCGCCGCGTGGAACACCACTTACCACTCCCGGTGCCCGTG
GCCGCAGCTACCAACGCGCACTTAGTGAGAGAATACGAACAGAGACGAGCGGCGGCCGAA
GCCAGCGGACAGAAGCTCCATATTACGTTTCAGGTGCTCTTCCGTATGCCGGACTTCATA
CGTCGCTACGTGGAAGGCGCGCCAGAGATATTCTCAACCTTCCCCGAAGATCCTGCTAAC
GATTTCAACGTGCAGACCGCTAAATTGGGTGTTGGTCTCATATCCGGTCGCTACTCGTTC
CCTACATCCGGCGGCGGGCAGGCGGGAGTGTCGCCTCACATGTACCGCGCGCTGGCCGGT
CGAGGACATCGAGAGTTCAGCTCGAAGAGACAGCAGGACGCACACGAATTCTACCTCCAT
CTCCTGACACTTATTGAGCGTAACAGCCGTCACAAGCCGAACCCGGCGGACTGTTTGAAG
TTGACCGTGGAAGAACGTGTCCAGTGTACGGAGTCTCTCGGCGTGAGGTACACCCGCCGC
GTGGAACACCACCTACCACTCCCGGTGCCCGTGGCCGCAGCTACCAACGCGCACTTAGTG
AGAGAATACGAACAGAGACGAGCGGCGGCCGAAGCCAGCGGACAGAAGCTAAAGACATTG
CGATTGGATGAGTGCTTGCTAAAAGCGACGCGTGCGCATGACACGCCCGCCTTTTATATA
CGGCCGATCCATACAAGGTACATATGTAAAGAATCCCCCTTCAGTGATCGCTCACTCGAT
TAA
Protein sequence:
MASLDLLVQHLPKITIPTSQQLVYKDECVYSFDNPESETGLYVSLTSFLGFGRNYVEQYF
QKTGNAVFLHILREKKPIPEPEQTGDGPEKKITRLAIGVEGGFDPDCGKPKYTYTEHYNV
VVLPGFHTFPWPNDALPDVVKKSVQAVLDADSPFKLAEAEALHGTWDGEKREVSVHSVNL
KQLDNGVKIPPSGWKCAKCDLTNNLWLNLTDGSILCGRRFFDGSGGNDHAVEHFRATGYP
LAVKLGTITADGTGDVYSYAEDDMVEDPYLAEHLKHFGINVQQLQKTEKSMVELELELNR
RTGEWNTIQESGSELRPLHGPALTGVNNLGNSCYINSVVQVLFRMPDFIRRYVEGAPEIF
STFPEDPANDFNVQTAKLGVGLISGRYSFPTSGGGQAGVSPHMYRALAGRGHREFSSKRQ
QDAHEFYLHLLTLIERNSRHKPNPADCLKLTVEERVQCTESLGVRYTRRVEHHLPLPVPV
AAATNAHLVREYEQRRAAAEASGQKLHITFQVLFRMPDFIRRYVEGAPEIFSTFPEDPAN
DFNVQTAKLGVGLISGRYSFPTSGGGQAGVSPHMYRALAGRGHREFSSKRQQDAHEFYLH
LLTLIERNSRHKPNPADCLKLTVEERVQCTESLGVRYTRRVEHHLPLPVPVAAATNAHLV
REYEQRRAAAEASGQKLKTLRLDECLLKATRAHDTPAFYIRPIHTRYICKESPFSDRSLD