| New model in OGS2.0 | DPOGS207858 |
|---|---|
| Genomic Position | scaffold3574:+ 24984-26379 |
| See gene structure | |
| CDS Length | 525 |
| Paired RNAseq reads | 206 |
| Single RNAseq reads | 1075 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009941 (3e-54) |
| Best Drosophila hit | CG12082 (4e-25) |
| Best Human hit | ubiquitin carboxyl-terminal hydrolase 5 isoform 2 (4e-31) |
| Best NR hit (blastp) | PREDICTED: similar to ubiquitin carboxyl-terminal hydrolase 5 [Tribolium castaneum] (9e-37) |
| Best NR hit (blastx) | PREDICTED: similar to ubiquitin carboxyl-terminal hydrolase 5 [Tribolium castaneum] (5e-36) |
| GeneOntology terms | GO:0016787 hydrolase activity GO:0008233 peptidase activity GO:0046872 metal ion binding GO:0008234 cysteine-type peptidase activity GO:0006511 ubiquitin-dependent protein catabolic process GO:0008270 zinc ion binding GO:0004221 ubiquitin thiolesterase activity GO:0005515 protein binding GO:0003674 molecular_function GO:0008150 biological_process GO:0005575 cellular_component |
| InterPro families | IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote IPR009060 UBA-like IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal |
| Orthology group | ND |
Nucleotide sequence:
ATGGACCTATCAAGCCTGCGTGGACGCGGTCTGCAGGCCTCTGAATGCCCTCTACCAGAC
ACCTCACCAGAGACCCCCGCCCCTGTCTACAACGAGGAACTGCTGGCTCAACTGTTGGAC
ATGGGATTCCCTATCGAGGCTTGTAAGAAGGCTCTATACTACAGCAACAACTCGGGTATG
GAGGCGGCGTCTCACTGGCTCATGGAGCACATGAATGATTGGGACTTCGCCAACAAGTTC
GAAGCGCCCGGCGCCAAATCTGATGCAGCAGCGGTGGATGAGGCGAGTTTAGAGCAAGTG
ACAGGTATGGGCTTCACGAGGACTCAGGCTATCAAAGCTCTCACAGCGACCGACGGTGAC
GTGGGGCGTGCGCTGGACTGGATCTTCAGCCACGCTGAACAACTCGATGAAGATACTAAC
CCTGGCTGCAGAGACGGACCGGAGAGTAAGTGGAACAGACAGACATACATACATACAACT
CGAAATGCAGTTATTTATATGAAACTAATATTTCAGGATTACTAG
Protein sequence:
MDLSSLRGRGLQASECPLPDTSPETPAPVYNEELLAQLLDMGFPIEACKKALYYSNNSGM
EAASHWLMEHMNDWDFANKFEAPGAKSDAAAVDEASLEQVTGMGFTRTQAIKALTATDGD
VGRALDWIFSHAEQLDEDTNPGCRDGPESKWNRQTYIHTTRNAVIYMKLIFQDY